Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYE63_RS03800 Genome accession   NZ_CP152053
Coordinates   773674..774471 (+) Length   265 a.a.
NCBI ID   WP_342604139.1    Uniprot ID   -
Organism   Peribacillus sp. FSL E2-0159     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 768674..779471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE63_RS03775 (NYE63_03770) - 768890..770041 (+) 1152 WP_342604136.1 thiolase family protein -
  NYE63_RS03780 (NYE63_03775) - 770174..771754 (+) 1581 WP_342604137.1 fatty acid--CoA ligase -
  NYE63_RS03785 (NYE63_03780) - 772158..772343 (-) 186 WP_342604138.1 YfhD family protein -
  NYE63_RS03790 (NYE63_03785) - 772452..772574 (-) 123 WP_081088510.1 YfhE family protein -
  NYE63_RS03795 (NYE63_03790) - 772628..773548 (-) 921 WP_342605673.1 TIGR01777 family oxidoreductase -
  NYE63_RS03800 (NYE63_03795) recX 773674..774471 (+) 798 WP_342604139.1 recombination regulator RecX Regulator
  NYE63_RS03805 (NYE63_03800) - 774547..774858 (+) 312 WP_063234815.1 YfhH family protein -
  NYE63_RS03810 (NYE63_03805) - 774899..775057 (-) 159 WP_342605674.1 small, acid-soluble spore protein K -
  NYE63_RS03815 (NYE63_03810) - 775169..775435 (+) 267 WP_101225953.1 YfhJ family protein -
  NYE63_RS03820 (NYE63_03815) - 775491..776468 (-) 978 WP_342604140.1 metal-dependent hydrolase -
  NYE63_RS03825 (NYE63_03820) mutY 776675..777793 (+) 1119 WP_342604141.1 A/G-specific adenine glycosylase -
  NYE63_RS03830 (NYE63_03825) - 777844..778113 (+) 270 WP_342604142.1 hypothetical protein -
  NYE63_RS03835 (NYE63_03830) - 778199..778423 (-) 225 WP_061461732.1 hypothetical protein -
  NYE63_RS03840 (NYE63_03835) fabL 778491..779240 (+) 750 WP_342604143.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31421.93 Da        Isoelectric Point: 7.2353

>NTDB_id=987000 NYE63_RS03800 WP_342604139.1 773674..774471(+) (recX) [Peribacillus sp. FSL E2-0159]
MPNITKITTQKKRKDRYNIFVDEKYAFSVDEEVLLKFHLKKGTEIDDLLLVEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFAKAYVRTHVNGGNKGPTTLKLELKEKGVQEKLVVEALKEYPLDSQIEH
ARKLAGKAVKKEKNISERALRLKVEQTLLRKGFPRDVIHEALEDVTVEKDEDEQWDSLCHHAEKMQRRYRNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPDGD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=987000 NYE63_RS03800 WP_342604139.1 773674..774471(+) (recX) [Peribacillus sp. FSL E2-0159]
ATGCCAAACATAACAAAAATAACAACCCAAAAGAAACGTAAAGATCGTTATAACATTTTCGTCGACGAAAAATATGCCTT
CAGTGTAGACGAAGAAGTGCTATTGAAATTTCATCTGAAAAAGGGTACGGAAATTGATGACCTGCTTTTGGTAGAAATAC
AATTCCATGATGAAATTCAAAAGGCATTTACCGATGCACTTAATTATTTATCATACCGGATGCGCTCCGAGTCGGAAATT
CGCCTTTATTTAAAAAAGAAGGAAACGGAAGAGCCGATCATTAAGGAAGCGATACATAAACTATACAGCTTTAACTATTT
AGACGACCTTGAATTTGCGAAGGCTTACGTAAGGACCCATGTGAACGGAGGCAATAAAGGGCCCACTACCCTTAAGCTCG
AGCTTAAGGAAAAAGGGGTGCAAGAAAAGTTGGTTGTCGAGGCATTGAAGGAATACCCTCTTGATAGTCAAATTGAACAT
GCAAGGAAACTTGCTGGAAAAGCGGTCAAAAAGGAAAAAAACATTTCCGAACGAGCTTTAAGGCTGAAAGTTGAACAAAC
CTTGTTACGGAAAGGTTTCCCTAGGGATGTCATCCATGAAGCGCTTGAAGATGTGACGGTTGAAAAGGATGAAGATGAAC
AATGGGATTCTCTTTGTCACCATGCCGAAAAAATGCAACGCCGATATAGAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGATGGTGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.421

97.736

0.483

Multiple sequence alignment