Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHB48_RS18435 Genome accession   NZ_CP152052
Coordinates   3774108..3775058 (-) Length   316 a.a.
NCBI ID   WP_342599308.1    Uniprot ID   -
Organism   Psychrobacillus sp. FSL H8-0483     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3769108..3780058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB48_RS18410 (MHB48_18410) - 3769630..3770241 (-) 612 WP_342599304.1 phosphatase PAP2 family protein -
  MHB48_RS18415 (MHB48_18415) - 3771143..3771385 (-) 243 WP_342601428.1 antibiotic biosynthesis monooxygenase -
  MHB48_RS18420 (MHB48_18420) - 3771382..3772383 (-) 1002 WP_342599305.1 siderophore ABC transporter substrate-binding protein -
  MHB48_RS18425 (MHB48_18425) - 3772404..3773165 (-) 762 WP_342599306.1 ABC transporter ATP-binding protein -
  MHB48_RS18430 (MHB48_18430) - 3773162..3774115 (-) 954 WP_342599307.1 iron chelate uptake ABC transporter family permease subunit -
  MHB48_RS18435 (MHB48_18435) ceuB 3774108..3775058 (-) 951 WP_342599308.1 ABC transporter permease Machinery gene
  MHB48_RS18440 (MHB48_18440) - 3775318..3776163 (-) 846 WP_342599309.1 DUF6612 family protein -
  MHB48_RS18445 (MHB48_18445) - 3776237..3777724 (-) 1488 WP_342599310.1 peptide MFS transporter -
  MHB48_RS18450 (MHB48_18450) - 3778066..3779784 (+) 1719 WP_342599311.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34814.10 Da        Isoelectric Point: 10.1633

>NTDB_id=986988 MHB48_RS18435 WP_342599308.1 3774108..3775058(-) (ceuB) [Psychrobacillus sp. FSL H8-0483]
MKKRYLVIALVALSLLSLFVGVTRISPMDLLDFTSEETQIFLISRLPRLIAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGILISMMVFTNATYMQKISFAFIFALAGTLLFMQILNRIKFKDAIFVPLVGLMFGNILASITTFFAYKANII
QNITVWLQGDFSLILKGRYELLYISVPVLIIAYFYANRFTVAGMGEDFARNLGLSYNRVLNLGLVLVALISTTVVLTVGM
IPFLGLIIPNIVSIYKGDHLEKTLPHTALLGVIFLLICDILGRVIIFPYEIPIGMTVGVIGSAIFLFLLFRGKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=986988 MHB48_RS18435 WP_342599308.1 3774108..3775058(-) (ceuB) [Psychrobacillus sp. FSL H8-0483]
ATGAAAAAAAGATATCTTGTAATTGCACTAGTCGCACTTTCTCTCTTATCTCTTTTTGTTGGTGTTACGAGAATATCACC
AATGGATTTGTTGGATTTTACTTCGGAAGAGACGCAAATATTTCTCATAAGCCGATTACCAAGACTAATTGCCATAATAC
TTGCAGGAGCAGGGATGAGTATTGCAGGGCTTATTATGCAGAGTCTTAGTAGAAATAAATTTGTATCCCCAACAACAGCT
GGTACACTTGATGCTACTCGCTTAGGGATTTTAATCTCGATGATGGTATTCACAAATGCAACGTATATGCAAAAGATTTC
GTTTGCATTTATATTTGCTTTAGCAGGAACATTGCTTTTCATGCAAATATTAAATCGGATTAAATTTAAAGATGCAATAT
TTGTTCCGCTTGTTGGTCTGATGTTCGGAAACATATTAGCTTCCATTACGACGTTTTTTGCTTACAAAGCAAATATTATT
CAAAATATTACTGTCTGGCTACAAGGAGACTTCTCCTTAATATTAAAAGGCAGATACGAACTGCTTTACATAAGTGTACC
TGTACTTATAATTGCTTATTTCTATGCTAATCGTTTTACGGTTGCTGGGATGGGTGAGGATTTTGCAAGAAACCTCGGTC
TATCTTACAATAGAGTGCTGAATTTAGGCTTGGTCCTAGTTGCATTAATTTCTACCACTGTCGTTTTGACAGTTGGAATG
ATCCCATTTTTAGGTTTAATCATCCCAAACATTGTATCTATTTATAAAGGGGACCATTTAGAAAAAACGCTACCACATAC
AGCATTGCTAGGAGTCATTTTTTTGTTAATATGCGACATTTTAGGTAGGGTAATAATTTTCCCATATGAAATCCCGATTG
GCATGACGGTTGGTGTAATCGGAAGTGCAATCTTCCTATTCTTGTTGTTTAGGGGGAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.313

99.051

0.538

Multiple sequence alignment