Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   MHB67_RS05080 Genome accession   NZ_CP152051
Coordinates   1055976..1056554 (+) Length   192 a.a.
NCBI ID   WP_024425481.1    Uniprot ID   A0A1L6ZJL9
Organism   Bacillus sp. FSL H8-0516     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1050976..1061554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB67_RS05060 (MHB67_05060) - 1051472..1052767 (-) 1296 WP_213404848.1 globin-coupled sensor protein -
  MHB67_RS05065 (MHB67_05065) - 1052859..1054391 (-) 1533 WP_342492833.1 FAD-dependent oxidoreductase -
  MHB67_RS05070 (MHB67_05070) - 1054533..1055393 (+) 861 WP_024425480.1 SDR family oxidoreductase -
  MHB67_RS05075 (MHB67_05075) - 1055450..1055686 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  MHB67_RS05080 (MHB67_05080) comK 1055976..1056554 (+) 579 WP_024425481.1 competence protein ComK Regulator
  MHB67_RS05085 (MHB67_05085) - 1056854..1057336 (+) 483 WP_024425482.1 hypothetical protein -
  MHB67_RS05090 (MHB67_05090) - 1057367..1058806 (-) 1440 WP_073204600.1 PLP-dependent aminotransferase family protein -
  MHB67_RS05095 (MHB67_05095) - 1058952..1060121 (+) 1170 WP_024425484.1 MFS transporter -
  MHB67_RS05100 (MHB67_05100) - 1060187..1060465 (+) 279 WP_024425485.1 barstar family protein -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22350.37 Da        Isoelectric Point: 8.7996

>NTDB_id=986907 MHB67_RS05080 WP_024425481.1 1055976..1056554(+) (comK) [Bacillus sp. FSL H8-0516]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=986907 MHB67_RS05080 WP_024425481.1 1055976..1056554(+) (comK) [Bacillus sp. FSL H8-0516]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATATCTCATAAACCTCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGTAACAGATATTAG

Domains


Predicted by InterproScan.

(10-158)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L6ZJL9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.979

100

0.62


Multiple sequence alignment