Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACOCI8_RS12390 Genome accession   NZ_CP184563
Coordinates   2515718..2516392 (-) Length   224 a.a.
NCBI ID   WP_096002288.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SCTW2018065     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2510718..2521392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCI8_RS12375 (ACOCI8_12375) - 2511898..2513787 (-) 1890 WP_000009400.1 FtsX-like permease family protein -
  ACOCI8_RS12380 (ACOCI8_12380) vraF 2513777..2514538 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  ACOCI8_RS12385 (ACOCI8_12385) graS 2514685..2515725 (-) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  ACOCI8_RS12390 (ACOCI8_12390) braR 2515718..2516392 (-) 675 WP_096002288.1 response regulator transcription factor GraR/ApsR Regulator
  ACOCI8_RS12395 (ACOCI8_12395) graX 2516408..2517331 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  ACOCI8_RS12400 (ACOCI8_12400) - 2517444..2517950 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ACOCI8_RS12405 (ACOCI8_12405) - 2518158..2518586 (-) 429 WP_000198503.1 hypothetical protein -
  ACOCI8_RS12410 (ACOCI8_12410) - 2518916..2519959 (-) 1044 WP_001030759.1 alpha/beta hydrolase -
  ACOCI8_RS12415 (ACOCI8_12415) - 2520110..2521177 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26076.94 Da        Isoelectric Point: 4.4019

>NTDB_id=986892 ACOCI8_RS12390 WP_096002288.1 2515718..2516392(-) (braR) [Staphylococcus aureus strain SCTW2018065]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNIPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=986892 ACOCI8_RS12390 WP_096002288.1 2515718..2516392(-) (braR) [Staphylococcus aureus strain SCTW2018065]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACATACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406