Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHI37_RS25220 Genome accession   NZ_CP152049
Coordinates   5882320..5883273 (-) Length   317 a.a.
NCBI ID   WP_076337112.1    Uniprot ID   A0A1R1D4P5
Organism   Paenibacillus sp. FSL H8-0548     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5877320..5888273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI37_RS25195 (MHI37_25195) fetB 5877613..5878377 (-) 765 WP_076337116.1 iron export ABC transporter permease subunit FetB -
  MHI37_RS25200 (MHI37_25200) - 5878365..5879117 (-) 753 WP_083676280.1 ATP-binding cassette domain-containing protein -
  MHI37_RS25205 (MHI37_25205) - 5879481..5880470 (-) 990 WP_076337115.1 siderophore ABC transporter substrate-binding protein -
  MHI37_RS25210 (MHI37_25210) - 5880631..5881392 (-) 762 WP_076337114.1 ABC transporter ATP-binding protein -
  MHI37_RS25215 (MHI37_25215) - 5881389..5882330 (-) 942 WP_076337113.1 iron chelate uptake ABC transporter family permease subunit -
  MHI37_RS25220 (MHI37_25220) ceuB 5882320..5883273 (-) 954 WP_076337112.1 ABC transporter permease Machinery gene
  MHI37_RS25225 (MHI37_25225) - 5884558..5885571 (-) 1014 WP_076337111.1 zinc-binding alcohol dehydrogenase family protein -
  MHI37_RS25230 (MHI37_25230) - 5885586..5886530 (-) 945 WP_076337110.1 aldo/keto reductase -
  MHI37_RS25235 (MHI37_25235) - 5886618..5888117 (-) 1500 WP_076337109.1 altronate dehydratase family protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34787.91 Da        Isoelectric Point: 9.7354

>NTDB_id=986850 MHI37_RS25220 WP_076337112.1 5882320..5883273(-) (ceuB) [Paenibacillus sp. FSL H8-0548]
MKLWHLFTVLIVLSITSLFIGVKDISPLDLFSLTEQQLQVLSISRIPRLISIIIAGVGMSVTGLIMQQLSRNKFVSPTTG
GTDDSARLGILVALMVFPSAGTIEKMLIAFAFALAGTFLFMKILDRLKFKDTIFIPLVGLMFGNVISSVTTFFAYKNDLI
QNISSWLQGSFSLVMSGRYELLYVSLPLLVLAYLYANKFTIAGLGEEFSTNLGMNHKLVVNIGLVIVALVSVIVILTVGT
LPFLGLIIPNIVTLYMGDHLKKNLSHTAVLGAIFVLVCDVISRLIIYPYEVPIGLTIGVIGSVIFLYLLMRRKAYEA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=986850 MHI37_RS25220 WP_076337112.1 5882320..5883273(-) (ceuB) [Paenibacillus sp. FSL H8-0548]
ATGAAGCTATGGCATCTCTTTACCGTGCTTATTGTACTATCGATTACTTCCCTGTTTATTGGGGTAAAGGACATTTCGCC
GCTTGACCTGTTCAGCTTAACGGAGCAGCAGCTGCAGGTGTTGTCGATTAGCCGTATCCCAAGACTTATCAGCATTATTA
TCGCTGGCGTAGGGATGAGTGTTACCGGCCTGATCATGCAGCAGCTAAGCCGCAATAAGTTCGTTTCGCCTACTACCGGG
GGGACGGATGATTCAGCTAGGCTCGGCATACTGGTTGCCTTAATGGTATTCCCGTCAGCCGGCACAATTGAAAAAATGCT
GATCGCTTTCGCCTTTGCGCTGGCGGGTACCTTTCTATTTATGAAAATCCTTGATCGCTTGAAATTTAAGGATACGATTT
TCATTCCCTTAGTTGGGTTGATGTTCGGCAATGTGATCAGCTCGGTGACGACTTTTTTTGCCTACAAGAATGATCTTATT
CAAAATATTTCCTCATGGCTGCAAGGCAGCTTCTCGCTTGTCATGAGTGGTCGTTACGAGCTGCTTTATGTGAGTCTGCC
GCTTCTCGTGCTGGCCTATCTGTATGCCAATAAGTTTACGATTGCAGGACTCGGTGAAGAGTTCTCGACCAATCTAGGCA
TGAATCACAAGCTTGTTGTTAACATTGGTCTTGTTATCGTGGCGCTCGTATCGGTAATCGTTATTTTGACCGTGGGCACG
CTGCCATTCCTTGGCCTTATTATTCCGAATATCGTGACATTGTACATGGGCGATCATTTGAAAAAAAACCTGTCGCATAC
GGCGGTCCTTGGCGCAATTTTCGTACTGGTGTGCGATGTGATCAGCCGACTGATTATTTACCCGTATGAGGTCCCTATCG
GTCTAACGATCGGCGTCATCGGCAGCGTCATTTTTCTTTACTTATTGATGAGGAGAAAGGCATATGAAGCTTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1R1D4P5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

99.685

0.527

Multiple sequence alignment