Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MHI37_RS11740 Genome accession   NZ_CP152049
Coordinates   2856438..2858174 (+) Length   578 a.a.
NCBI ID   WP_083676399.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL H8-0548     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2851438..2863174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI37_RS11725 (MHI37_11725) - 2853220..2853837 (-) 618 WP_256710611.1 TetR/AcrR family transcriptional regulator -
  MHI37_RS11730 (MHI37_11730) - 2854099..2854533 (+) 435 WP_076338207.1 MarR family transcriptional regulator -
  MHI37_RS11735 (MHI37_11735) rcrP 2854631..2856394 (+) 1764 WP_076338208.1 ABC transporter ATP-binding protein Regulator
  MHI37_RS11740 (MHI37_11740) rcrQ 2856438..2858174 (+) 1737 WP_083676399.1 ABC transporter ATP-binding protein Regulator
  MHI37_RS11745 (MHI37_11745) - 2858640..2860949 (+) 2310 WP_076338210.1 glycoside hydrolase family 2 TIM barrel-domain containing protein -
  MHI37_RS11750 (MHI37_11750) - 2860998..2862779 (+) 1782 WP_076338211.1 family 43 glycosylhydrolase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 63747.10 Da        Isoelectric Point: 5.9856

>NTDB_id=986839 MHI37_RS11740 WP_083676399.1 2856438..2858174(+) (rcrQ) [Paenibacillus sp. FSL H8-0548]
MGKLVAYCRPYVPLIIVALLLSVVGTLFTIVGPSKLQEMTDHITVGLMGKIDMDAVFGIGILLSVLYGLSVIFSFFQGYI
MATVTQKVSKSLRTRISKKINKLPLKYFDSTSNGDVLSRVTNDIDTIGQTMNQSVGMLVTSVTMLVGSLFMMFYTNVWMT
LTAIISTFLGFGFMTIMIKKSQTHFVHQQANLGALNGHVEEIFSGYDVVKVYNGERKAKETFNEINDKLYESSWKSQFLS
GLTMPLMMFVGNFGYVAVCIVGGALAMDGQISFGVIVAFMLYVRLFTQPLGQIAQAATSLQSTAAAAARVFEFLEEKELE
DESHKSKVLKDVKGQVEFRNVSFGYDPDKLIINDFSARALPGQKIAIVGPTGAGKTTIVNLLMRFYELNGGEIVIDGVPI
HELPRENVHEQFCMVLQDTWLFEGTIKENIVFNKQGVTDAEVKDVSKAVGIDHFIRTLLHGYDTVLNEQVNLSAGQKQLI
TIARALIANAPLLILDEATSSVDTRTELLIQEAMDRLMVGRTSFVIAHRLSTIKNADIILVMKDGDIIESGNHKELLAAN
GFYADLYNSQFETAEAAL

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=986839 MHI37_RS11740 WP_083676399.1 2856438..2858174(+) (rcrQ) [Paenibacillus sp. FSL H8-0548]
ATGGGCAAGCTCGTCGCGTATTGCAGGCCATATGTACCTCTTATTATCGTGGCCCTGCTGCTGTCCGTCGTCGGCACCCT
ATTTACGATTGTCGGGCCAAGCAAGCTGCAGGAAATGACGGATCACATTACCGTAGGGCTAATGGGCAAAATCGACATGG
ACGCGGTTTTTGGCATCGGTATACTGCTTTCCGTCCTATACGGTTTAAGCGTCATCTTCTCCTTCTTCCAAGGCTACATT
ATGGCTACGGTAACGCAGAAGGTATCGAAAAGCTTGCGCACGCGCATCTCGAAGAAGATTAACAAGCTTCCATTGAAATA
TTTTGATTCCACAAGCAATGGCGATGTACTGAGCCGTGTCACCAATGACATCGATACGATCGGACAGACGATGAATCAGA
GTGTCGGGATGCTTGTAACTTCCGTCACCATGCTTGTGGGCTCATTGTTCATGATGTTCTATACCAATGTATGGATGACG
TTGACGGCGATTATTTCGACGTTTCTAGGATTTGGCTTTATGACCATAATGATCAAAAAATCGCAAACGCATTTCGTTCA
CCAGCAGGCGAACCTAGGTGCATTGAATGGTCATGTCGAGGAAATATTCTCAGGTTACGATGTCGTTAAGGTTTATAATG
GAGAGCGGAAAGCGAAGGAAACCTTTAACGAAATCAACGATAAATTGTATGAAAGCTCATGGAAGTCGCAATTTTTATCC
GGCTTGACGATGCCGCTCATGATGTTCGTCGGCAACTTCGGCTACGTGGCGGTATGTATTGTCGGCGGAGCATTAGCAAT
GGATGGTCAAATTTCGTTTGGTGTTATCGTTGCTTTCATGCTCTATGTCCGGCTGTTCACTCAGCCCCTTGGGCAAATTG
CGCAGGCCGCGACAAGTCTGCAATCGACTGCAGCTGCAGCCGCACGCGTTTTTGAATTTTTGGAAGAGAAGGAGCTTGAG
GACGAGAGCCATAAATCGAAGGTGCTTAAGGACGTTAAGGGTCAGGTAGAGTTCCGGAACGTTTCCTTCGGATATGATCC
GGATAAGCTTATCATTAACGATTTCTCAGCCCGCGCCTTACCAGGCCAGAAGATCGCTATCGTTGGTCCGACAGGGGCGG
GGAAGACAACTATCGTTAATTTGCTAATGCGGTTTTATGAGCTGAACGGCGGGGAAATTGTCATCGATGGTGTACCGATC
CATGAGCTTCCTCGGGAAAATGTTCATGAGCAGTTTTGTATGGTGCTTCAGGACACGTGGTTATTCGAGGGCACAATCAA
AGAAAATATCGTCTTCAATAAGCAGGGCGTTACCGATGCTGAAGTGAAGGACGTCTCTAAGGCCGTCGGCATTGATCATT
TTATCAGAACCTTGCTTCATGGCTACGACACGGTACTGAACGAGCAAGTGAACCTTTCCGCAGGTCAGAAGCAGCTCATT
ACGATTGCAAGAGCGCTTATTGCAAACGCCCCGCTGCTCATCCTCGACGAGGCGACGAGCTCCGTCGATACGAGAACAGA
GCTTCTCATTCAAGAAGCAATGGACCGTCTGATGGTAGGAAGAACCTCGTTCGTAATCGCGCATAGGCTGTCTACGATAA
AGAATGCCGATATCATCCTCGTCATGAAGGACGGAGATATTATCGAGAGCGGCAATCACAAGGAACTGCTTGCTGCGAAT
GGCTTCTATGCCGATTTGTATAATAGCCAGTTTGAGACTGCGGAAGCTGCTCTGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(354-500)

ABC transporter transmembrane region (ABC_membrane)

(15-290)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

59.272

99.827

0.592

Multiple sequence alignment