Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MHI37_RS11735 Genome accession   NZ_CP152049
Coordinates   2854631..2856394 (+) Length   587 a.a.
NCBI ID   WP_076338208.1    Uniprot ID   A0A1R1CUI0
Organism   Paenibacillus sp. FSL H8-0548     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2849631..2861394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI37_RS11720 (MHI37_11720) - 2850824..2853172 (-) 2349 WP_076338206.1 MMPL family transporter -
  MHI37_RS11725 (MHI37_11725) - 2853220..2853837 (-) 618 WP_256710611.1 TetR/AcrR family transcriptional regulator -
  MHI37_RS11730 (MHI37_11730) - 2854099..2854533 (+) 435 WP_076338207.1 MarR family transcriptional regulator -
  MHI37_RS11735 (MHI37_11735) rcrP 2854631..2856394 (+) 1764 WP_076338208.1 ABC transporter ATP-binding protein Regulator
  MHI37_RS11740 (MHI37_11740) rcrQ 2856438..2858174 (+) 1737 WP_083676399.1 ABC transporter ATP-binding protein Regulator
  MHI37_RS11745 (MHI37_11745) - 2858640..2860949 (+) 2310 WP_076338210.1 glycoside hydrolase family 2 TIM barrel-domain containing protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64771.34 Da        Isoelectric Point: 9.2645

>NTDB_id=986838 MHI37_RS11735 WP_076338208.1 2854631..2856394(+) (rcrP) [Paenibacillus sp. FSL H8-0548]
MLKILKYFNPKNVWFIVISTAFIVFQVWLDLKLPDYLAEITKLVQTEGSSLSEVWKPGAYMMICAIGSLIASFIVVYLVA
QSAASLAKRLRSMLFDKVESFSMAEMNQFSTASLITRSTNDITQVQTIVAMGLQVMIKAPILAGWAIVKISSKSWQWTLS
SGVSVALLLLMIAIVILFAMPKFRMIQGLTDQLNRVTREGLHGLRVIRAYNAGPSQEAKFEYANRELTDANLFTSRLMAL
MMPVMSLIMSGLSLAIYWIGAYLINGADTAARLGLFSDMVIFSSYAMQIVMAFMMLSMVFFMLPRASVSAKRVIEVLNTE
PSIKDGGSKSTNAAKAGEIEFRNVSFKYADSDEYVLRDISFVARRGETVAFIGSTGSGKSTLLNLIPRFYDVSEGAVLVQ
GLNVKEYTLRDLHNKLGYVPQKTVLFSGTVTSNVAYGDNGRVEGSAEDVKKAVAIARGQEFVEKLEGGYEGSISQGGSNL
SGGQKQRLSIARAVFRKPDIYIFDDSFSALDYKTDRQLRSMLNQETVGATNLIVGQRIGTIKEADLILVLDEGKIVGRGT
HQELLQTCEVYRQIANSQLSKEELEIG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=986838 MHI37_RS11735 WP_076338208.1 2854631..2856394(+) (rcrP) [Paenibacillus sp. FSL H8-0548]
ATGCTAAAGATTTTGAAGTATTTCAATCCTAAAAATGTTTGGTTTATCGTCATCAGTACCGCATTTATCGTGTTCCAGGT
ATGGCTCGATCTTAAGCTTCCCGATTATTTGGCAGAAATCACAAAGCTGGTGCAGACAGAAGGAAGCTCCTTAAGCGAGG
TATGGAAACCAGGCGCCTACATGATGATATGCGCGATTGGAAGCTTAATTGCATCTTTCATCGTCGTCTATTTGGTCGCT
CAGAGCGCCGCTTCACTCGCGAAGAGGCTCAGAAGCATGCTCTTCGACAAGGTTGAATCATTCTCGATGGCCGAAATGAA
TCAATTCTCGACGGCGAGCCTTATTACCCGTTCTACGAACGATATTACGCAAGTGCAAACGATCGTGGCGATGGGGCTGC
AAGTCATGATAAAAGCACCTATTCTAGCAGGCTGGGCGATTGTGAAGATCTCCAGCAAGAGCTGGCAATGGACGCTCTCA
TCCGGTGTTTCGGTCGCGCTGCTGCTTCTCATGATTGCGATCGTTATTTTGTTCGCCATGCCGAAGTTCAGAATGATTCA
AGGATTAACGGATCAATTGAACCGAGTAACAAGAGAAGGCTTGCATGGTCTGCGAGTTATTCGTGCTTATAATGCAGGAC
CGAGCCAAGAAGCGAAATTCGAATACGCGAATCGGGAGTTAACCGATGCGAATCTGTTCACAAGCCGATTAATGGCCTTA
ATGATGCCGGTCATGAGTCTTATCATGAGTGGATTAAGCTTGGCTATTTATTGGATCGGCGCTTATTTGATCAATGGAGC
GGATACAGCGGCAAGACTTGGCTTGTTCAGTGACATGGTTATCTTCTCTTCCTATGCCATGCAGATCGTTATGGCTTTCA
TGATGTTATCGATGGTTTTCTTTATGCTGCCGCGTGCGTCGGTTTCTGCCAAGCGCGTAATAGAAGTATTAAATACGGAA
CCAAGCATCAAGGATGGTGGATCGAAATCGACTAATGCCGCCAAAGCAGGAGAGATTGAATTCCGGAATGTCAGCTTCAA
ATATGCGGATTCGGATGAATATGTACTTAGAGATATCAGCTTCGTTGCGCGCAGGGGCGAGACGGTAGCATTCATCGGCT
CGACGGGCAGCGGCAAGAGTACGCTGCTGAACTTAATTCCGAGATTTTATGACGTGTCAGAGGGAGCGGTACTTGTCCAA
GGGTTGAATGTGAAAGAGTACACGCTGCGGGATCTGCACAATAAGCTTGGTTACGTTCCTCAGAAAACCGTATTATTCAG
CGGAACCGTAACGTCTAATGTCGCCTATGGGGATAACGGGCGAGTGGAAGGATCTGCTGAGGATGTGAAGAAAGCGGTAG
CGATCGCCAGAGGCCAAGAATTCGTGGAAAAGCTGGAAGGCGGGTACGAAGGCAGCATCTCGCAAGGCGGCTCGAACTTG
TCCGGCGGGCAGAAGCAGCGGTTATCTATCGCTAGAGCGGTATTCCGGAAGCCTGACATTTACATTTTTGATGATTCCTT
CTCAGCACTTGATTACAAGACAGACCGTCAGCTGCGCTCCATGCTGAATCAAGAAACGGTGGGCGCTACGAACCTGATTG
TAGGGCAGCGAATCGGAACGATAAAGGAAGCCGATCTCATACTCGTTCTCGACGAAGGCAAGATCGTAGGAAGAGGTACG
CATCAAGAGCTGCTTCAGACCTGCGAGGTTTATCGTCAGATCGCGAACTCTCAGTTATCGAAGGAGGAGCTTGAAATTGG
CTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1R1CUI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.085

100

0.521

Multiple sequence alignment