Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHH29_RS14835 Genome accession   NZ_CP152048
Coordinates   2892056..2892637 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0046     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2887056..2897637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH29_RS14810 (MHH29_14810) - 2887722..2888900 (+) 1179 WP_144665315.1 N-acetyldiaminopimelate deacetylase -
  MHH29_RS14815 (MHH29_14815) - 2888951..2889193 (+) 243 WP_024424725.1 YkuS family protein -
  MHH29_RS14820 (MHH29_14820) - 2889216..2890025 (-) 810 WP_058337402.1 mechanosensitive ion channel family protein -
  MHH29_RS14825 (MHH29_14825) ahpA 2890297..2890839 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  MHH29_RS14830 (MHH29_14830) - 2891115..2891573 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  MHH29_RS14835 (MHH29_14835) rok 2892056..2892637 (+) 582 WP_007498648.1 hypothetical protein Regulator
  MHH29_RS14840 (MHH29_14840) - 2892700..2893617 (-) 918 WP_342495404.1 sigmaE regulated sporulation protein -
  MHH29_RS14845 (MHH29_14845) - 2893701..2894282 (+) 582 WP_172793300.1 molybdenum cofactor guanylyltransferase -
  MHH29_RS14850 (MHH29_14850) - 2894312..2895328 (+) 1017 WP_138278466.1 thiazole biosynthesis adenylyltransferase ThiF -
  MHH29_RS14855 (MHH29_14855) glp 2895338..2896612 (+) 1275 WP_342495405.1 gephyrin-like molybdotransferase Glp -
  MHH29_RS14860 (MHH29_14860) mobB 2896594..2897121 (+) 528 WP_024719560.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MHH29_RS14865 (MHH29_14865) - 2897114..2897605 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=986818 MHH29_RS14835 WP_007498648.1 2892056..2892637(+) (rok) [Bacillus sp. FSL K6-0046]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=986818 MHH29_RS14835 WP_007498648.1 2892056..2892637(+) (rok) [Bacillus sp. FSL K6-0046]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCAATTAAAAGCTCTGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment