Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MHH29_RS13540 Genome accession   NZ_CP152048
Coordinates   2656741..2656938 (+) Length   65 a.a.
NCBI ID   WP_024720057.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0046     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2651741..2661938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH29_RS13510 (MHH29_13510) - 2652141..2652320 (+) 180 WP_008348517.1 YjzC family protein -
  MHH29_RS13515 (MHH29_13515) - 2652490..2653755 (+) 1266 WP_008348516.1 MFS transporter -
  MHH29_RS13520 (MHH29_13520) - 2653875..2654069 (-) 195 WP_008348514.1 YjzD family protein -
  MHH29_RS13525 (MHH29_13525) - 2654282..2655022 (+) 741 WP_007499048.1 hypothetical protein -
  MHH29_RS13530 (MHH29_13530) - 2655098..2655673 (+) 576 WP_224559526.1 nad binding enzyme -
  MHH29_RS13535 (MHH29_13535) med 2655764..2656729 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  MHH29_RS13540 (MHH29_13540) comZ 2656741..2656938 (+) 198 WP_024720057.1 ComZ family protein Regulator
  MHH29_RS13545 (MHH29_13545) - 2656951..2657184 (-) 234 WP_008348506.1 hypothetical protein -
  MHH29_RS13550 (MHH29_13550) - 2657354..2658292 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  MHH29_RS13555 (MHH29_13555) fabF 2658314..2659555 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  MHH29_RS13560 (MHH29_13560) - 2659633..2660427 (+) 795 WP_056407963.1 DUF2268 domain-containing protein -
  MHH29_RS13565 (MHH29_13565) - 2660599..2661579 (+) 981 WP_342495362.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7319.36 Da        Isoelectric Point: 4.2259

>NTDB_id=986809 MHH29_RS13540 WP_024720057.1 2656741..2656938(+) (comZ) [Bacillus sp. FSL K6-0046]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=986809 MHH29_RS13540 WP_024720057.1 2656741..2656938(+) (comZ) [Bacillus sp. FSL K6-0046]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCAGAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment