Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MHH29_RS13160 Genome accession   NZ_CP152048
Coordinates   2574899..2575849 (+) Length   316 a.a.
NCBI ID   WP_342462419.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0046     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2569899..2580849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH29_RS13140 (MHH29_13140) - 2571136..2571618 (+) 483 WP_008348662.1 hypothetical protein -
  MHH29_RS13145 (MHH29_13145) - 2571649..2573088 (-) 1440 WP_342495343.1 PLP-dependent aminotransferase family protein -
  MHH29_RS13150 (MHH29_13150) - 2573232..2574401 (+) 1170 WP_203144230.1 MFS transporter -
  MHH29_RS13155 (MHH29_13155) - 2574464..2574742 (+) 279 WP_342495344.1 barstar family protein -
  MHH29_RS13160 (MHH29_13160) ceuB 2574899..2575849 (+) 951 WP_342462419.1 ABC transporter permease Machinery gene
  MHH29_RS13165 (MHH29_13165) - 2575842..2576792 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  MHH29_RS13170 (MHH29_13170) - 2576783..2577541 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  MHH29_RS13175 (MHH29_13175) - 2577564..2578508 (+) 945 WP_342495345.1 siderophore ABC transporter substrate-binding protein -
  MHH29_RS13180 (MHH29_13180) - 2578846..2579802 (+) 957 WP_142154715.1 LCP family protein -
  MHH29_RS13185 (MHH29_13185) - 2580037..2580471 (-) 435 WP_060780949.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34927.25 Da        Isoelectric Point: 9.7475

>NTDB_id=986805 MHH29_RS13160 WP_342462419.1 2574899..2575849(+) (ceuB) [Bacillus sp. FSL K6-0046]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKIAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=986805 MHH29_RS13160 WP_342462419.1 2574899..2575849(+) (ceuB) [Bacillus sp. FSL K6-0046]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATAGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment