Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MHH29_RS12095 Genome accession   NZ_CP152048
Coordinates   2376369..2377160 (+) Length   263 a.a.
NCBI ID   WP_342495318.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0046     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2371369..2382160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH29_RS12060 (MHH29_12060) - 2371456..2372004 (+) 549 WP_008341670.1 thioredoxin family protein -
  MHH29_RS12065 (MHH29_12065) - 2372344..2372811 (+) 468 WP_007496690.1 DUF393 domain-containing protein -
  MHH29_RS12070 (MHH29_12070) - 2372847..2374103 (-) 1257 WP_052320913.1 transcriptional regulator -
  MHH29_RS12075 (MHH29_12075) - 2374374..2374961 (+) 588 WP_024720283.1 nitroreductase -
  MHH29_RS12080 (MHH29_12080) - 2374997..2375152 (-) 156 WP_035703748.1 YfhD family protein -
  MHH29_RS12085 (MHH29_12085) - 2375214..2375324 (-) 111 WP_017358836.1 YfhE family protein -
  MHH29_RS12090 (MHH29_12090) - 2375377..2376273 (-) 897 WP_342495317.1 TIGR01777 family oxidoreductase -
  MHH29_RS12095 (MHH29_12095) recX 2376369..2377160 (+) 792 WP_342495318.1 recombination regulator RecX Regulator
  MHH29_RS12100 (MHH29_12100) - 2377164..2377478 (+) 315 WP_008341991.1 YfhH family protein -
  MHH29_RS12105 (MHH29_12105) - 2377502..2377675 (-) 174 WP_003217811.1 YpzG family protein -
  MHH29_RS12110 (MHH29_12110) - 2377701..2377850 (-) 150 WP_342495319.1 small, acid-soluble spore protein K -
  MHH29_RS12115 (MHH29_12115) - 2377967..2378239 (+) 273 WP_017366871.1 YfhJ family protein -
  MHH29_RS12120 (MHH29_12120) - 2378541..2379524 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=986800 MHH29_RS12095 WP_342495318.1 2376369..2377160(+) (recX) [Bacillus sp. FSL K6-0046]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEILHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=986800 MHH29_RS12095 WP_342495318.1 2376369..2377160(+) (recX) [Bacillus sp. FSL K6-0046]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTTTACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGTTATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631

Multiple sequence alignment