Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | MHH29_RS08540 | Genome accession | NZ_CP152048 |
| Coordinates | 1644212..1646647 (+) | Length | 811 a.a. |
| NCBI ID | WP_007496263.1 | Uniprot ID | A0A5K1N9Z5 |
| Organism | Bacillus sp. FSL K6-0046 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1639212..1651647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH29_RS08525 (MHH29_08525) | - | 1642083..1642547 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| MHH29_RS08530 (MHH29_08530) | - | 1642562..1643119 (+) | 558 | WP_007496258.1 | UvrB/UvrC motif-containing protein | - |
| MHH29_RS08535 (MHH29_08535) | - | 1643124..1644215 (+) | 1092 | WP_008345444.1 | protein arginine kinase | - |
| MHH29_RS08540 (MHH29_08540) | clpC | 1644212..1646647 (+) | 2436 | WP_007496263.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| MHH29_RS08545 (MHH29_08545) | radA | 1646741..1648120 (+) | 1380 | WP_017359160.1 | DNA repair protein RadA | Machinery gene |
| MHH29_RS08550 (MHH29_08550) | disA | 1648123..1649202 (+) | 1080 | WP_007496267.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| MHH29_RS08555 (MHH29_08555) | - | 1649356..1650456 (+) | 1101 | WP_047946821.1 | PIN/TRAM domain-containing protein | - |
| MHH29_RS08560 (MHH29_08560) | ispD | 1650470..1651159 (+) | 690 | WP_008345432.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| MHH29_RS08565 (MHH29_08565) | ispF | 1651163..1651639 (+) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90025.76 Da Isoelectric Point: 6.2469
>NTDB_id=986796 MHH29_RS08540 WP_007496263.1 1644212..1646647(+) (clpC) [Bacillus sp. FSL K6-0046]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=986796 MHH29_RS08540 WP_007496263.1 1644212..1646647(+) (clpC) [Bacillus sp. FSL K6-0046]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGTACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGCAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAGATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCCGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTGGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTTCTAAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGCTATGATGAGGGCGGTCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCAGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGTGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGTACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGCAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAGATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCCGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTGGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTTCTAAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGCTATGATGAGGGCGGTCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCAGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGTGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |