Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHB41_RS11265 | Genome accession | NZ_CP152045 |
| Coordinates | 2204814..2205149 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL H7-0578 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2199814..2210149
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB41_RS11245 (MHB41_11245) | gcvT | 2200288..2201388 (-) | 1101 | WP_340900162.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHB41_RS11250 (MHB41_11250) | - | 2201950..2203620 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| MHB41_RS11255 (MHB41_11255) | - | 2203635..2204432 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| MHB41_RS11260 (MHB41_11260) | - | 2204616..2204780 (+) | 165 | WP_217008802.1 | anti-repressor SinI family protein | - |
| MHB41_RS11265 (MHB41_11265) | sinR | 2204814..2205149 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHB41_RS11270 (MHB41_11270) | - | 2205217..2206017 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| MHB41_RS11275 (MHB41_11275) | - | 2206075..2206647 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| MHB41_RS11280 (MHB41_11280) | tapA | 2206700..2207227 (-) | 528 | WP_061109347.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHB41_RS11285 (MHB41_11285) | - | 2207527..2207805 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| MHB41_RS11290 (MHB41_11290) | - | 2207840..2208034 (-) | 195 | WP_046311750.1 | YqzE family protein | - |
| MHB41_RS11295 (MHB41_11295) | comGG | 2208094..2208477 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| MHB41_RS11300 (MHB41_11300) | comGF | 2208474..2209001 (-) | 528 | WP_259407219.1 | competence type IV pilus minor pilin ComGF | - |
| MHB41_RS11305 (MHB41_11305) | comGE | 2208913..2209227 (-) | 315 | WP_041106865.1 | competence type IV pilus minor pilin ComGE | - |
| MHB41_RS11310 (MHB41_11310) | comGD | 2209211..2209657 (-) | 447 | WP_046311754.1 | competence type IV pilus minor pilin ComGD | - |
| MHB41_RS11315 (MHB41_11315) | comGC | 2209650..2209943 (-) | 294 | WP_061109348.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=986671 MHB41_RS11265 WP_024422969.1 2204814..2205149(+) (sinR) [Bacillus sp. FSL H7-0578]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986671 MHB41_RS11265 WP_024422969.1 2204814..2205149(+) (sinR) [Bacillus sp. FSL H7-0578]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |