Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHI16_RS11195 Genome accession   NZ_CP152044
Coordinates   2206580..2207383 (-) Length   267 a.a.
NCBI ID   WP_003215740.1    Uniprot ID   A0AB34QSQ5
Organism   Bacillus sp. FSL K6-0923     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2201580..2212383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI16_RS11180 (MHI16_11180) - 2203789..2204025 (+) 237 WP_144462757.1 DUF2627 domain-containing protein -
  MHI16_RS11185 (MHI16_11185) - 2204060..2204797 (-) 738 WP_268466051.1 glycerophosphodiester phosphodiesterase -
  MHI16_RS11190 (MHI16_11190) - 2205023..2206123 (-) 1101 WP_268466054.1 Rap family tetratricopeptide repeat protein -
  MHI16_RS11195 (MHI16_11195) spo0A 2206580..2207383 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MHI16_RS11200 (MHI16_11200) spoIVB 2207669..2208946 (-) 1278 WP_058014714.1 SpoIVB peptidase -
  MHI16_RS11205 (MHI16_11205) recN 2209145..2210881 (-) 1737 WP_061408509.1 DNA repair protein RecN Machinery gene
  MHI16_RS11210 (MHI16_11210) argR 2210915..2211364 (-) 450 WP_058014712.1 transcriptional regulator ArgR -
  MHI16_RS11215 (MHI16_11215) - 2211524..2212378 (-) 855 WP_061408512.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29946.45 Da        Isoelectric Point: 6.3914

>NTDB_id=986608 MHI16_RS11195 WP_003215740.1 2206580..2207383(-) (spo0A) [Bacillus sp. FSL K6-0923]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRRNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=986608 MHI16_RS11195 WP_003215740.1 2206580..2207383(-) (spo0A) [Bacillus sp. FSL K6-0923]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGATGGCCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGACATGACCAAACAG
CCAAGTGTGATTATGCTAACGGCGTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGGGCATCCTATTTCAT
CTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCACCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGAAACAAACCTGAACCGAAACGCAGAAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGTGTACCTGCTCATATTAAAGGTTACTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
CGAGCTTCTCGGAAGCATCACAAAAGTGTTGTATCCAGACATCGCGAAGAAATTTAACACGACCGCGAGCAGGGTCGAAC
GAGCAATTCGTCATGCGATTGAAGTGGCTTGGAGTAGAGGAAACATCGACTCCATTTCCTCACTCTTTGGTTATACAGTC
AGCATGTCTAAAGCAAAACCAACCAATTCTGAATTTATCGCAATGGTGGCTGACCGTCTCCGCTTGGAGCATCGAGCTAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment