Detailed information NTG0986607

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACOCJB_RS06965
• Genome accession: NZ_CP184557
• Coordinates: 1350727..1351809 (-)
• Length: 360 a.a.
• NCBI ID: WP_014532468.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain SCTW2018482
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1345727..1356809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCJB_RS06945 (ACOCJB_06945)	-	1346321..1346440 (-)	120	WP_031774844.1	hypothetical protein	-
ACOCJB_RS06950 (ACOCJB_06950)	secA	1346482..1349013 (-)	2532	WP_000506529.1	preprotein translocase subunit SecA	-
ACOCJB_RS06955 (ACOCJB_06955)	hpf	1349427..1349999 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACOCJB_RS06960 (ACOCJB_06960)	-	1350060..1350734 (-)	675	WP_001057962.1	ComF family protein	-
ACOCJB_RS06965 (ACOCJB_06965)	comFA	1350727..1351809 (-)	1083	WP_014532468.1	DEAD/DEAH box helicase	Machinery gene
ACOCJB_RS06970 (ACOCJB_06970)	fakB1	1352173..1353039 (-)	867	WP_000686345.1	fatty acid kinase binding subunit FakB1	-
ACOCJB_RS06975 (ACOCJB_06975)	-	1353183..1353824 (+)	642	WP_000192949.1	YigZ family protein	-
ACOCJB_RS06980 (ACOCJB_06980)	-	1353988..1355043 (-)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
ACOCJB_RS06985 (ACOCJB_06985)	gdpS	1355361..1356431 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42024.50 Da
• Isoelectric Point: 9.6802

>NTDB_id=986607 ACOCJB_RS06965 WP_014532468.1 1350727..1351809(-) (comFA) [Staphylococcus aureus strain SCTW2018482]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
IEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=986607 ACOCJB_RS06965 WP_014532468.1 1350727..1351809(-) (comFA) [Staphylococcus aureus strain SCTW2018482]
ATGGATAATGTAACAAGATATAAAATAACAGAAAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAACAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGAGCAGGTAAGACAGAAATGATGTTCCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
ATTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TAGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGTGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369