Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MHI16_RS07015 Genome accession   NZ_CP152044
Coordinates   1398489..1398950 (-) Length   153 a.a.
NCBI ID   WP_012009774.1    Uniprot ID   A0AAE4B719
Organism   Bacillus sp. FSL K6-0923     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1393489..1403950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI16_RS06990 (MHI16_06990) - 1394097..1394981 (+) 885 WP_058014125.1 cation diffusion facilitator family transporter -
  MHI16_RS06995 (MHI16_06995) - 1395044..1395196 (-) 153 WP_200964039.1 hypothetical protein -
  MHI16_RS07000 (MHI16_07000) - 1395498..1396037 (+) 540 WP_058014124.1 RDD family protein -
  MHI16_RS07005 (MHI16_07005) - 1396163..1397473 (+) 1311 WP_058014123.1 MFS transporter -
  MHI16_RS07010 (MHI16_07010) - 1397547..1398455 (+) 909 WP_012009773.1 chemotaxis protein -
  MHI16_RS07015 (MHI16_07015) kre 1398489..1398950 (-) 462 WP_012009774.1 YkyB family protein Regulator
  MHI16_RS07020 (MHI16_07020) - 1399460..1399675 (-) 216 WP_012009775.1 hypothetical protein -
  MHI16_RS07025 (MHI16_07025) - 1399843..1400061 (+) 219 WP_058014122.1 hypothetical protein -
  MHI16_RS07030 (MHI16_07030) - 1400084..1401361 (-) 1278 WP_058014121.1 MFS transporter -
  MHI16_RS07035 (MHI16_07035) - 1401435..1401932 (-) 498 WP_058014120.1 L,D-transpeptidase family protein -
  MHI16_RS07040 (MHI16_07040) - 1402089..1402946 (-) 858 WP_058014119.1 metallophosphoesterase -
  MHI16_RS07045 (MHI16_07045) fadH 1403084..1403848 (+) 765 WP_058014118.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17741.33 Da        Isoelectric Point: 10.2452

>NTDB_id=986599 MHI16_RS07015 WP_012009774.1 1398489..1398950(-) (kre) [Bacillus sp. FSL K6-0923]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQLLQTYVGLKEKPTATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=986599 MHI16_RS07015 WP_012009774.1 1398489..1398950(-) (kre) [Bacillus sp. FSL K6-0923]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAGCTGCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTACCGCCA
CAAAACAAAAATCACATTATACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771

Multiple sequence alignment