Detailed information NTG0986569

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: MHB69_RS16840
• Genome accession: NZ_CP152043
• Coordinates: 3213229..3214626 (-)
• Length: 465 a.a.
• NCBI ID: WP_267542717.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-0994
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3208229..3219626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHB69_RS16805 (MHB69_16805)	flgL	3208430..3209338 (-)	909	WP_342495792.1	flagellar hook-associated protein FlgL	-
MHB69_RS16810 (MHB69_16810)	flgK	3209348..3210868 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
MHB69_RS16815 (MHB69_16815)	-	3210884..3211366 (-)	483	WP_024423619.1	flagellar protein FlgN	-
MHB69_RS16820 (MHB69_16820)	flgM	3211385..3211648 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHB69_RS16825 (MHB69_16825)	-	3211728..3212147 (-)	420	WP_061110142.1	TIGR03826 family flagellar region protein	-
MHB69_RS16830 (MHB69_16830)	comFC	3212204..3212860 (-)	657	WP_267542716.1	ComF family protein	Machinery gene
MHB69_RS16835 (MHB69_16835)	-	3212887..3213180 (-)	294	WP_024423623.1	competence protein ComFB	-
MHB69_RS16840 (MHB69_16840)	comFA	3213229..3214626 (-)	1398	WP_267542717.1	DEAD/DEAH box helicase	Machinery gene
MHB69_RS16845 (MHB69_16845)	-	3214747..3215589 (-)	843	WP_024423625.1	DegV family protein	-
MHB69_RS16850 (MHB69_16850)	degU	3215805..3216494 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHB69_RS16855 (MHB69_16855)	degS	3216559..3217734 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
MHB69_RS16860 (MHB69_16860)	-	3217955..3218623 (+)	669	WP_012011434.1	YigZ family protein	-

Sequence

Protein

• Length: 465 a.a.
• Molecular weight: 53015.94 Da
• Isoelectric Point: 9.8426

>NTDB_id=986569 MHB69_RS16840 WP_267542717.1 3213229..3214626(-) (comFA) [Bacillus sp. FSL K6-0994]
MNMDKAMELMGRLHSRHLLTVETKCPQSNLDWLEEKGLVNRSPAIERKANGFTCCRCGVSHKRYFAHSPCEVCQKDCVYC
RSCIMMGKAAECGFLYEWTGPQMVETCRAELTWQGELSKGQKRASERMIEAIKNKFDLLVWAVCGAGKTEVLFHGIEYAL
NQGMSVCIATPRTDVVLELEPRLRKAFQGVIITVLYGGSSQRFQIAPLVITTTHQLMRYKNAFDVLIVDEVDAFPYSMDE
RLQFAVLKAMRKNGGVRIYLSATPSKKMTREVSRGKLEAIKIPLRFHEHPLPVPTFHWIGHWKKRLKKNQLPPKVMNWMQ
RHIANKRRILLFVPSIAVMKKVTKILREQSLNVEGVSADDPDRKQKVQHFRDYVYDVLVTTTILERGVTIPNVQVGVLGS
ESTIFTESALVQISGRVGRHPDYCTGDVFLFHFGLTRSMKQAKKHIAKMNDTAAKEFSEKQCGFN

Nucleotide

• Length: 1398 bp

>NTDB_id=986569 MHB69_RS16840 WP_267542717.1 3213229..3214626(-) (comFA) [Bacillus sp. FSL K6-0994]
ATGAATATGGACAAAGCAATGGAACTAATGGGGCGGCTGCATTCACGCCATCTGCTCACCGTTGAAACAAAGTGCCCACA
GTCCAATTTAGATTGGCTGGAGGAGAAGGGCTTAGTCAATCGGTCTCCAGCCATTGAGAGGAAAGCAAATGGTTTTACAT
GCTGCCGGTGCGGTGTATCACACAAGCGGTATTTCGCTCATTCTCCATGTGAGGTGTGTCAAAAGGATTGCGTGTACTGT
AGATCATGCATCATGATGGGAAAAGCAGCAGAATGTGGGTTTCTTTATGAATGGACAGGTCCACAAATGGTAGAAACATG
TCGAGCCGAATTAACATGGCAGGGAGAGCTGTCTAAAGGACAAAAAAGAGCGTCAGAAAGAATGATTGAAGCTATTAAAA
ACAAATTTGATCTACTTGTTTGGGCGGTTTGCGGAGCAGGGAAAACGGAAGTGCTTTTTCACGGAATCGAATATGCATTA
AATCAAGGAATGAGTGTCTGTATTGCGACACCTAGAACAGATGTTGTGCTTGAACTCGAACCGCGGCTTAGAAAAGCATT
TCAAGGGGTGATAATTACCGTACTTTATGGAGGCAGTTCTCAAAGGTTTCAAATAGCACCGCTTGTGATCACCACAACAC
ACCAGCTGATGAGATACAAAAATGCTTTTGATGTGCTCATTGTAGATGAAGTCGATGCCTTCCCTTATTCAATGGATGAG
CGACTCCAATTTGCTGTTCTAAAGGCGATGAGAAAGAACGGAGGGGTTAGGATTTATTTAAGTGCGACACCCTCTAAAAA
AATGACGAGAGAGGTTTCTCGCGGAAAACTGGAAGCGATAAAAATTCCTTTGCGTTTTCACGAGCACCCATTACCCGTAC
CGACCTTTCATTGGATCGGACATTGGAAAAAGAGATTAAAAAAGAACCAGCTGCCCCCTAAAGTGATGAATTGGATGCAG
AGACATATTGCAAACAAGAGAAGAATATTACTTTTTGTTCCTTCAATTGCTGTCATGAAGAAGGTAACGAAGATTCTTCG
AGAACAATCCTTAAACGTGGAGGGAGTATCTGCCGATGATCCGGATAGGAAACAAAAGGTTCAGCACTTTAGAGATTACG
TATACGATGTACTAGTTACAACCACTATTCTAGAAAGAGGCGTAACCATTCCAAATGTTCAAGTGGGGGTACTAGGTTCG
GAATCTACTATTTTTACAGAGAGTGCACTTGTTCAGATTTCTGGACGGGTAGGCAGACATCCGGATTATTGTACAGGAGA
TGTTTTCCTTTTTCATTTTGGTTTAACGAGAAGTATGAAACAAGCAAAGAAGCATATCGCAAAAATGAATGATACGGCTG
CAAAAGAGTTTTCTGAAAAACAGTGTGGGTTCAACTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (116-265)

• Helicase conserved C-terminal domain (Helicase_C) (324-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.974	98.065	0.51
comFA/cflA	Streptococcus pneumoniae Rx1	37.225	97.634	0.363
comFA/cflA	Streptococcus pneumoniae D39	37.225	97.634	0.363
comFA/cflA	Streptococcus pneumoniae R6	37.225	97.634	0.363
comFA/cflA	Streptococcus pneumoniae TIGR4	37.004	97.634	0.361