Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHB69_RS08645 Genome accession   NZ_CP152043
Coordinates   1701877..1702257 (+) Length   126 a.a.
NCBI ID   WP_051149980.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0994     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1696877..1707257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB69_RS08635 (MHB69_08635) - 1697373..1700516 (+) 3144 WP_342496179.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  MHB69_RS08640 (MHB69_08640) - 1700710..1701618 (+) 909 WP_024425124.1 trypsin-like serine protease -
  MHB69_RS08645 (MHB69_08645) nucA/comI 1701877..1702257 (+) 381 WP_051149980.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHB69_RS08650 (MHB69_08650) - 1702403..1703251 (+) 849 WP_342496180.1 STAS domain-containing protein -
  MHB69_RS08655 (MHB69_08655) - 1703284..1703826 (-) 543 WP_024425127.1 IseA DL-endopeptidase inhibitor family protein -
  MHB69_RS08660 (MHB69_08660) - 1704122..1704565 (+) 444 WP_034283419.1 hypothetical protein -
  MHB69_RS08665 (MHB69_08665) lexA 1704611..1705231 (-) 621 WP_034283422.1 transcriptional repressor LexA -
  MHB69_RS08670 (MHB69_08670) yneA 1705390..1705701 (+) 312 WP_024425130.1 cell division suppressor protein YneA -
  MHB69_RS08675 (MHB69_08675) - 1705719..1706366 (+) 648 WP_034283427.1 recombinase family protein -
  MHB69_RS08680 (MHB69_08680) - 1706436..1706666 (+) 231 WP_024425132.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13761.43 Da        Isoelectric Point: 8.5068

>NTDB_id=986546 MHB69_RS08645 WP_051149980.1 1701877..1702257(+) (nucA/comI) [Bacillus sp. FSL K6-0994]
MGTLFGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=986546 MHB69_RS08645 WP_051149980.1 1701877..1702257(+) (nucA/comI) [Bacillus sp. FSL K6-0994]
ATGGGCACGTTGTTTGGCGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTTCAATATGTCAGTCCATCTGATAATAGGGGGGCAGGCTCATG
GGTCGGGCATCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment