Detailed information NTG0986536

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACOCJF_RS12675
• Genome accession: NZ_CP184555
• Coordinates: 2530199..2531281 (-)
• Length: 360 a.a.
• NCBI ID: WP_014532468.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain SCTW2018694
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2525199..2536281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCJF_RS12655 (ACOCJF_12655)	-	2525793..2525912 (-)	120	WP_031774844.1	hypothetical protein	-
ACOCJF_RS12660 (ACOCJF_12660)	secA	2525954..2528485 (-)	2532	WP_000506529.1	preprotein translocase subunit SecA	-
ACOCJF_RS12665 (ACOCJF_12665)	hpf	2528899..2529471 (-)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACOCJF_RS12670 (ACOCJF_12670)	-	2529532..2530206 (-)	675	WP_001057962.1	ComF family protein	-
ACOCJF_RS12675 (ACOCJF_12675)	comFA	2530199..2531281 (-)	1083	WP_014532468.1	DEAD/DEAH box helicase	Machinery gene
ACOCJF_RS12680 (ACOCJF_12680)	fakB1	2531645..2532511 (-)	867	WP_000686345.1	fatty acid kinase binding subunit FakB1	-
ACOCJF_RS12685 (ACOCJF_12685)	-	2532655..2533296 (+)	642	WP_000192949.1	YigZ family protein	-
ACOCJF_RS12690 (ACOCJF_12690)	-	2533460..2534515 (-)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
ACOCJF_RS12695 (ACOCJF_12695)	gdpS	2534833..2535903 (+)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42024.50 Da
• Isoelectric Point: 9.6802

>NTDB_id=986536 ACOCJF_RS12675 WP_014532468.1 2530199..2531281(-) (comFA) [Staphylococcus aureus strain SCTW2018694]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
IEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=986536 ACOCJF_RS12675 WP_014532468.1 2530199..2531281(-) (comFA) [Staphylococcus aureus strain SCTW2018694]
ATGGATAATGTAACAAGATATAAAATAACAGAAAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAACAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGAGCAGGTAAGACAGAAATGATGTTCCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
ATTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGGTTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TAGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGTGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

• Type III restriction enzyme, res subunit (ResIII) (25-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369