Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   MHB69_RS05060 Genome accession   NZ_CP152043
Coordinates   997548..998126 (+) Length   192 a.a.
NCBI ID   WP_041117040.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0994     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 992548..1003126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB69_RS05040 (MHB69_05040) - 993042..994337 (-) 1296 WP_024426546.1 globin-coupled sensor protein -
  MHB69_RS05045 (MHB69_05045) - 994431..995963 (-) 1533 WP_041117038.1 FAD-dependent oxidoreductase -
  MHB69_RS05050 (MHB69_05050) - 996105..996965 (+) 861 WP_342496061.1 SDR family oxidoreductase -
  MHB69_RS05055 (MHB69_05055) - 997022..997258 (-) 237 WP_008348804.1 IDEAL domain-containing protein -
  MHB69_RS05060 (MHB69_05060) comK 997548..998126 (+) 579 WP_041117040.1 competence protein ComK Regulator
  MHB69_RS05065 (MHB69_05065) - 998425..998907 (+) 483 WP_070325675.1 hypothetical protein -
  MHB69_RS05070 (MHB69_05070) - 999190..999465 (+) 276 WP_340900249.1 barstar family protein -
  MHB69_RS05075 (MHB69_05075) - 999675..1000628 (+) 954 WP_034282168.1 LCP family protein -
  MHB69_RS05080 (MHB69_05080) - 1000697..1001059 (-) 363 WP_034282166.1 hypothetical protein -
  MHB69_RS05085 (MHB69_05085) - 1001216..1001833 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -
  MHB69_RS05090 (MHB69_05090) lepB 1001833..1002345 (+) 513 WP_034282162.1 signal peptidase I -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22292.33 Da        Isoelectric Point: 8.7962

>NTDB_id=986528 MHB69_RS05060 WP_041117040.1 997548..998126(+) (comK) [Bacillus sp. FSL K6-0994]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQAVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=986528 MHB69_RS05060 WP_041117040.1 997548..998126(+) (comK) [Bacillus sp. FSL K6-0994]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAGCCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

60.938

100

0.609

Multiple sequence alignment