Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHI46_RS01945 Genome accession   NZ_CP152042
Coordinates   360627..361055 (-) Length   142 a.a.
NCBI ID   WP_039176411.1    Uniprot ID   A0AAX0Z579
Organism   Bacillus sp. FSL K6-1000     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 355627..366055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI46_RS01915 (MHI46_01915) - 355790..356119 (+) 330 WP_039182972.1 YckD family protein -
  MHI46_RS01920 (MHI46_01920) - 356162..356926 (-) 765 WP_058837296.1 MBL fold metallo-hydrolase -
  MHI46_RS01925 (MHI46_01925) - 357042..357458 (+) 417 WP_039176401.1 Lrp/AsnC family transcriptional regulator -
  MHI46_RS01930 (MHI46_01930) - 357487..358293 (+) 807 WP_064498645.1 AAC(3) family N-acetyltransferase -
  MHI46_RS01935 (MHI46_01935) - 358295..358681 (-) 387 WP_064498646.1 competence protein ComJ -
  MHI46_RS01940 (MHI46_01940) - 358802..360499 (-) 1698 WP_064498647.1 methyl-accepting chemotaxis protein -
  MHI46_RS01945 (MHI46_01945) nucA/comI 360627..361055 (-) 429 WP_039176411.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHI46_RS01950 (MHI46_01950) - 361423..363492 (+) 2070 WP_058837300.1 hydantoinase/oxoprolinase family protein -
  MHI46_RS01955 (MHI46_01955) - 363482..365470 (+) 1989 WP_064498648.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15971.96 Da        Isoelectric Point: 6.2215

>NTDB_id=986462 MHI46_RS01945 WP_039176411.1 360627..361055(-) (nucA/comI) [Bacillus sp. FSL K6-1000]
MKLLKMILLLLLIVIGVATGYIQLEQGKQETANSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKHSDEQRDRS
LHGIPTKRGYDRDEWPMAMCKEGGSGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIID

Nucleotide


Download         Length: 429 bp        

>NTDB_id=986462 MHI46_RS01945 WP_039176411.1 360627..361055(-) (nucA/comI) [Bacillus sp. FSL K6-1000]
ATGAAACTTCTTAAAATGATTCTCTTGCTTTTATTGATTGTCATTGGTGTAGCAACAGGCTATATCCAGCTAGAGCAAGG
GAAACAAGAGACAGCGAATTCATCTTATGACAAAACCATTCATTTTCCATCAGACCGCTATCCAGAAACAGCCAAGCACA
TAGAAGAAGCCATTGATGAAGGTCATTCGTCCATTTGTACAATTGACCGTAAACATAGTGATGAGCAGAGAGATCGATCA
CTACATGGCATTCCAACAAAGCGCGGGTATGATCGGGACGAATGGCCAATGGCGATGTGCAAAGAAGGAGGCAGTGGAGC
TTCTGTCAAATATGTACGCCCTTCTGATAATAGAGGCGCAGGCTCGTGGGTTAGTCATCAATTATCGGATGATCCTGACG
GCACAAGAATTCAATTTATCATCGATTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

65.789

80.282

0.528

Multiple sequence alignment