Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACOCJF_RS00515 Genome accession   NZ_CP184555
Coordinates   97560..98405 (-) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SCTW2018694     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 92560..103405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCJF_RS00470 (ACOCJF_00470) - 92815..93091 (+) 277 Protein_88 site-specific integrase -
  ACOCJF_RS00475 (ACOCJF_00475) - 93084..93311 (+) 228 Protein_89 Abi family protein -
  ACOCJF_RS00480 (ACOCJF_00480) rpsR 93548..93790 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACOCJF_RS00485 (ACOCJF_00485) ssbA 93842..94345 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACOCJF_RS00490 (ACOCJF_00490) rpsF 94366..94662 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACOCJF_RS00495 (ACOCJF_00495) - 94906..95097 (+) 192 WP_001052481.1 hypothetical protein -
  ACOCJF_RS00500 (ACOCJF_00500) ychF 95183..96280 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ACOCJF_RS00505 (ACOCJF_00505) - 96292..96495 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACOCJF_RS00510 (ACOCJF_00510) - 96525..97406 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  ACOCJF_RS00515 (ACOCJF_00515) spo0J 97560..98405 (-) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACOCJF_RS00520 (ACOCJF_00520) - 99069..100172 (+) 1104 WP_000655690.1 PLP-dependent transferase -
  ACOCJF_RS00525 (ACOCJF_00525) metC 100169..101329 (+) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  ACOCJF_RS00530 (ACOCJF_00530) - 101298..103139 (+) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=986461 ACOCJF_RS00515 WP_001825659.1 97560..98405(-) (spo0J) [Staphylococcus aureus strain SCTW2018694]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=986461 ACOCJF_RS00515 WP_001825659.1 97560..98405(-) (spo0J) [Staphylococcus aureus strain SCTW2018694]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381


Multiple sequence alignment