Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   NST80_RS08690 Genome accession   NZ_CP152039
Coordinates   1867922..1868998 (-) Length   358 a.a.
NCBI ID   WP_045769055.1    Uniprot ID   -
Organism   Streptococcus sp. FSL K6-1323     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1862922..1873998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS08665 (NST80_08665) - 1863067..1863849 (+) 783 WP_045769056.1 ABC transporter ATP-binding protein -
  NST80_RS08670 (NST80_08670) - 1864033..1866099 (-) 2067 WP_183138274.1 sodium:proton antiporter -
  NST80_RS08675 (NST80_08675) - 1866108..1866350 (-) 243 WP_014634967.1 hypothetical protein -
  NST80_RS08680 (NST80_08680) - 1866347..1866895 (-) 549 WP_045772008.1 class I SAM-dependent methyltransferase -
  NST80_RS08685 (NST80_08685) - 1866892..1867836 (-) 945 WP_004183328.1 TIGR01212 family radical SAM protein -
  NST80_RS08690 (NST80_08690) sepM 1867922..1868998 (-) 1077 WP_045769055.1 SepM family pheromone-processing serine protease Regulator
  NST80_RS08695 (NST80_08695) coaD 1868976..1869473 (-) 498 WP_014632676.1 pantetheine-phosphate adenylyltransferase -
  NST80_RS08700 (NST80_08700) rsmD 1869506..1870054 (-) 549 WP_231910681.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NST80_RS08705 (NST80_08705) trxB 1870194..1871114 (-) 921 WP_014632674.1 thioredoxin-disulfide reductase -
  NST80_RS08710 (NST80_08710) - 1871180..1871404 (-) 225 WP_002884393.1 DUF4059 family protein -
  NST80_RS08715 (NST80_08715) - 1871616..1872359 (-) 744 WP_014632672.1 amino acid ABC transporter ATP-binding protein -
  NST80_RS08720 (NST80_08720) - 1872359..1873105 (-) 747 WP_096832659.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38978.63 Da        Isoelectric Point: 9.2472

>NTDB_id=986340 NST80_RS08690 WP_045769055.1 1867922..1868998(-) (sepM) [Streptococcus sp. FSL K6-1323]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSSENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=986340 NST80_RS08690 WP_045769055.1 1867922..1868998(-) (sepM) [Streptococcus sp. FSL K6-1323]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACTGTAGACAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCCCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGGAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTCTATGTACTTCAGGTGGCTGACGATTCTAGCTTTAAGGGTGTTCTTAAT
ATTGCCGATACGGTGACAGCTGTTAATGGCAAGACCTTTGATAATTCTGCTGACTTGATTAAATACGTTCAGGGACTTAA
GCTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCTACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTCAAGAGTTCTGAAAATGTGAAGTTTAAACTTGAT
GGTGTTGGCGGCCCAAGTGCGGGTCTTATGTTTACCCTAGCTATTTACGATCAGGTGTCTGGTCAAGATCTTAAGGCTGG
CCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCTGTCGGTGATATCGGTGGTGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTCGTACCTAATAATCCAGTAACCAAGGAAATGAAAAAGGCTGATCCAGAT
GCCAAAACCAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATTGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623


Multiple sequence alignment