Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   NST80_RS06715 Genome accession   NZ_CP152039
Coordinates   1475317..1475619 (-) Length   100 a.a.
NCBI ID   WP_045768898.1    Uniprot ID   A0AAX1YB66
Organism   Streptococcus sp. FSL K6-1323     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1470317..1480619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST80_RS06705 (NST80_06705) - 1470798..1472159 (-) 1362 WP_183136272.1 HEPN domain-containing protein -
  NST80_RS06710 (NST80_06710) - 1472163..1475153 (-) 2991 WP_183138227.1 type I restriction endonuclease subunit R -
  NST80_RS06715 (NST80_06715) HI0659 1475317..1475619 (-) 303 WP_045768898.1 helix-turn-helix transcriptional regulator Machinery gene
  NST80_RS06720 (NST80_06720) - 1475621..1475974 (-) 354 WP_045768899.1 type II toxin-antitoxin system RelE/ParE family toxin -
  NST80_RS06725 (NST80_06725) - 1476211..1476975 (-) 765 WP_045768900.1 SDR family NAD(P)-dependent oxidoreductase -
  NST80_RS06730 (NST80_06730) - 1477007..1478164 (-) 1158 WP_183138228.1 Mbeg1-like protein -
  NST80_RS06735 (NST80_06735) - 1478274..1478900 (+) 627 WP_045768902.1 Pr6Pr family membrane protein -
  NST80_RS06740 (NST80_06740) - 1478937..1479779 (-) 843 WP_045768903.1 Cof-type HAD-IIB family hydrolase -
  NST80_RS06745 (NST80_06745) - 1479931..1480320 (+) 390 WP_045769008.1 hypothetical protein -

Sequence

Protein


Download         Length: 100 a.a.        Molecular weight: 10979.96 Da        Isoelectric Point: 10.0576

>NTDB_id=986329 NST80_RS06715 WP_045768898.1 1475317..1475619(-) (HI0659) [Streptococcus sp. FSL K6-1323]
MTLEKNPAIGSSWDDLQKTIFTKEEIAASELRVALMLEIIDARKKQGISQKKLEELSGVKQPVIARMEKGKTAPQLDTVL
KILASLGKTLAVVPLDSHVK

Nucleotide


Download         Length: 303 bp        

>NTDB_id=986329 NST80_RS06715 WP_045768898.1 1475317..1475619(-) (HI0659) [Streptococcus sp. FSL K6-1323]
ATGACCCTAGAAAAGAATCCAGCAATTGGAAGTAGTTGGGATGATTTACAGAAAACTATTTTCACTAAAGAGGAAATTGC
GGCGAGTGAACTCCGTGTCGCACTGATGCTTGAGATTATTGATGCTCGTAAAAAACAAGGCATTTCCCAAAAGAAACTAG
AAGAGCTAAGTGGTGTCAAACAACCTGTTATCGCACGTATGGAGAAAGGAAAAACGGCACCTCAGTTAGATACGGTTCTT
AAAATACTGGCTAGTCTAGGAAAGACATTGGCAGTAGTCCCACTTGATTCACATGTGAAGTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

62.069

87

0.54

Multiple sequence alignment