Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MHH37_RS12455 Genome accession   NZ_CP152038
Coordinates   2491379..2493070 (-) Length   563 a.a.
NCBI ID   WP_014823484.1    Uniprot ID   F2F933
Organism   Solibacillus sp. FSL K6-1781     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2486379..2498070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH37_RS12435 (MHH37_12435) - 2487725..2488159 (-) 435 WP_342573333.1 hypothetical protein -
  MHH37_RS12440 (MHH37_12440) - 2488505..2488981 (+) 477 WP_339262279.1 DNA polymerase III subunit alpha -
  MHH37_RS12445 (MHH37_12445) spo0A 2489129..2489920 (-) 792 WP_014823486.1 sporulation transcription factor Spo0A -
  MHH37_RS12450 (MHH37_12450) - 2490265..2491191 (-) 927 WP_065215709.1 SpoIVB peptidase S55 domain-containing protein -
  MHH37_RS12455 (MHH37_12455) recN 2491379..2493070 (-) 1692 WP_014823484.1 DNA repair protein RecN Machinery gene
  MHH37_RS12460 (MHH37_12460) argR 2493087..2493536 (-) 450 WP_008404230.1 transcriptional regulator ArgR -
  MHH37_RS12465 (MHH37_12465) - 2493761..2494579 (-) 819 WP_008404232.1 TlyA family RNA methyltransferase -
  MHH37_RS12470 (MHH37_12470) dxs 2494583..2496481 (-) 1899 WP_008404233.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MHH37_RS12475 (MHH37_12475) - 2496571..2497455 (-) 885 WP_342573335.1 polyprenyl synthetase family protein -
  MHH37_RS12480 (MHH37_12480) xseB 2497459..2497686 (-) 228 WP_008404237.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 563 a.a.        Molecular weight: 63683.22 Da        Isoelectric Point: 4.7270

>NTDB_id=986266 MHH37_RS12455 WP_014823484.1 2491379..2493070(-) (recN) [Solibacillus sp. FSL K6-1781]
MLRELSIRNFAIIDDLTVSFFGGLTVLTGETGAGKSIIIDAVNILAGGRGSTEFIRHGEKKAELGGLFHVDNSQHPIFAK
LEEHGIESEEDTIILRRDLHDSGKSVCRVNGKLVPLSVLRDIGGSLIDIHGQHENQELMDEKFHINLLDHYAHNKLQPVK
ARYDEAFEAYRQLKREVAELSMDEQRMAQRIDLYQFQIQELEQAGLKVDEEEALDEERLRLMNFHKIFERANIAYSAISD
DGTGLDFIGNAMNALEDIVALDSNFKEASEAVTSSFYALQDAAYQVKNVLDDLEYDAERLNEVEQRLALYQNMKRKYGTT
VEEILTYHEKIEEELSQLMNRDETLQKNEQLLAKMEADLNKIAEELTTIRKENAIKLSDAIMNELRMLHMEKAQFIVKFE
PLNQLDANGKDFVAFYISTNVGEPPKSLPKVASGGELSRMMLALKTIFSSSNGITSIIFDEVDTGVSGRVAQAIAEKIAA
ISVNSQVLCISHLPQVAAMADHHYYIKKQVEHNRTFTSITEMEEKERIVEISRMMSGAEITDLTLQHASELIHMANERKE
MMN

Nucleotide


Download         Length: 1692 bp        

>NTDB_id=986266 MHH37_RS12455 WP_014823484.1 2491379..2493070(-) (recN) [Solibacillus sp. FSL K6-1781]
TTGTTAAGAGAATTAAGCATTCGAAATTTTGCTATTATTGATGATTTAACCGTTAGTTTTTTTGGTGGTTTAACTGTTTT
GACAGGTGAAACAGGTGCCGGAAAATCGATTATTATTGATGCGGTTAATATATTGGCTGGCGGGCGCGGCTCAACGGAGT
TTATCCGCCACGGAGAGAAAAAGGCTGAACTTGGCGGATTATTTCATGTAGATAATAGTCAGCATCCGATTTTTGCAAAA
CTTGAAGAACATGGGATTGAATCAGAAGAAGATACGATTATTTTACGACGGGACCTGCATGATTCAGGAAAAAGCGTTTG
CAGAGTGAACGGCAAACTTGTCCCATTATCTGTTTTGCGTGATATTGGCGGCAGTTTAATTGATATTCATGGGCAACATG
AAAACCAAGAGCTTATGGATGAAAAATTCCATATCAATTTACTGGATCATTATGCACATAATAAGCTTCAGCCTGTGAAA
GCAAGGTATGATGAAGCGTTTGAAGCGTATCGTCAGTTAAAAAGAGAAGTGGCTGAGCTAAGTATGGACGAGCAGCGGAT
GGCACAGCGCATTGATTTATATCAATTCCAAATTCAGGAGCTGGAACAGGCCGGATTAAAAGTTGACGAAGAAGAAGCAT
TGGATGAAGAACGACTTCGTTTAATGAATTTTCATAAAATATTCGAACGTGCGAACATTGCATATTCAGCGATTTCCGAT
GATGGAACCGGACTGGATTTCATTGGTAATGCCATGAATGCACTGGAGGATATTGTTGCACTCGATTCGAATTTCAAAGA
GGCTTCAGAAGCGGTCACTTCCAGCTTTTATGCATTGCAGGATGCAGCATATCAAGTGAAAAATGTGCTGGATGATTTAG
AGTATGACGCAGAGCGTTTGAATGAGGTCGAGCAGCGTCTTGCTTTATATCAAAATATGAAACGTAAGTATGGAACGACA
GTTGAAGAGATTTTAACGTATCACGAAAAAATCGAAGAAGAGTTGAGCCAGCTTATGAACCGTGATGAAACATTGCAGAA
AAATGAGCAATTGCTGGCGAAAATGGAAGCAGATTTAAATAAAATTGCAGAAGAATTGACGACAATCCGCAAAGAAAATG
CAATTAAGCTAAGTGACGCGATTATGAATGAACTACGTATGCTGCATATGGAAAAAGCGCAGTTTATCGTTAAATTCGAG
CCATTGAATCAGCTGGACGCAAACGGCAAGGATTTTGTCGCATTCTATATTTCAACAAATGTTGGGGAACCACCGAAGTC
CTTGCCTAAAGTCGCTTCCGGAGGGGAACTTTCCCGTATGATGTTGGCACTTAAAACAATTTTCTCTTCATCAAATGGCA
TTACGTCAATAATTTTTGATGAGGTTGATACAGGTGTCAGCGGACGTGTAGCACAGGCAATTGCAGAAAAGATTGCAGCA
ATTTCAGTCAATTCACAAGTATTATGTATTTCTCACTTGCCGCAAGTTGCTGCAATGGCGGATCATCATTACTACATTAA
AAAGCAAGTAGAGCATAACCGTACATTTACGTCGATTACGGAAATGGAAGAAAAGGAACGAATCGTGGAGATCAGCCGAA
TGATGAGTGGAGCTGAAATAACAGACCTGACATTACAACATGCTTCAGAATTAATTCATATGGCCAATGAACGTAAAGAA
ATGATGAACTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2F933

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

52.962

100

0.54

Multiple sequence alignment