Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACAK31_RS05210 Genome accession   NZ_AP031581
Coordinates   1109137..1110078 (+) Length   313 a.a.
NCBI ID   WP_001159457.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain JUNP496     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1104137..1115078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK31_RS05200 (JUNP496_1043) basA 1104561..1106408 (+) 1848 WP_000910242.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  ACAK31_RS05205 (JUNP496_1044) basB 1106479..1108506 (-) 2028 WP_000939832.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACAK31_RS05210 (JUNP496_1045) ceuB 1109137..1110078 (+) 942 WP_001159457.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ACAK31_RS05215 (JUNP496_1046) bauC 1110078..1111025 (+) 948 WP_001223282.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACAK31_RS05220 (JUNP496_1047) bauE 1111022..1111792 (+) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACAK31_RS05225 (JUNP496_1048) bauB 1111799..1112767 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33979.03 Da        Isoelectric Point: 8.4665

>NTDB_id=98625 ACAK31_RS05210 WP_001159457.1 1109137..1110078(+) (ceuB) [Acinetobacter baumannii strain JUNP496]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=98625 ACAK31_RS05210 WP_001159457.1 1109137..1110078(+) (ceuB) [Acinetobacter baumannii strain JUNP496]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGGGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment