Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NYE62_RS07120 Genome accession   NZ_CP152037
Coordinates   1396143..1396607 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus sp. FSL K6-2861     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1391143..1401607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE62_RS07100 (NYE62_07100) - 1391623..1393443 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  NYE62_RS07105 (NYE62_07105) - 1393468..1394637 (-) 1170 WP_015417364.1 aminotransferase A -
  NYE62_RS07110 (NYE62_07110) - 1394838..1394999 (-) 162 WP_007409608.1 hypothetical protein -
  NYE62_RS07115 (NYE62_07115) cheV 1395188..1396099 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  NYE62_RS07120 (NYE62_07120) kre 1396143..1396607 (-) 465 WP_003154622.1 YkyB family protein Regulator
  NYE62_RS07125 (NYE62_07125) - 1396730..1398022 (-) 1293 WP_032868138.1 MFS transporter -
  NYE62_RS07130 (NYE62_07130) - 1398098..1398592 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  NYE62_RS07135 (NYE62_07135) - 1398667..1399530 (-) 864 WP_256683780.1 metallophosphoesterase -
  NYE62_RS07140 (NYE62_07140) fadH 1399674..1400438 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  NYE62_RS07145 (NYE62_07145) - 1400552..1401100 (+) 549 WP_007409614.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=986203 NYE62_RS07120 WP_003154622.1 1396143..1396607(-) (kre) [Bacillus sp. FSL K6-2861]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=986203 NYE62_RS07120 WP_003154622.1 1396143..1396607(-) (kre) [Bacillus sp. FSL K6-2861]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment