Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   NYE62_RS05650 Genome accession   NZ_CP152037
Coordinates   1130834..1131787 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus sp. FSL K6-2861     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1125834..1136787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE62_RS05625 (NYE62_05625) argF 1127652..1128623 (+) 972 WP_342497287.1 ornithine carbamoyltransferase -
  NYE62_RS05630 (NYE62_05630) - 1128699..1128878 (+) 180 WP_003155070.1 YjzC family protein -
  NYE62_RS05635 (NYE62_05635) - 1128915..1129100 (-) 186 WP_003155069.1 YjzD family protein -
  NYE62_RS05640 (NYE62_05640) - 1129361..1130095 (+) 735 WP_342497288.1 hypothetical protein -
  NYE62_RS05645 (NYE62_05645) - 1130178..1130744 (+) 567 WP_342497289.1 hypothetical protein -
  NYE62_RS05650 (NYE62_05650) med 1130834..1131787 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  NYE62_RS05655 (NYE62_05655) comZ 1131800..1131991 (+) 192 WP_003155061.1 ComZ family protein Regulator
  NYE62_RS05660 (NYE62_05660) - 1132020..1132238 (-) 219 WP_007409123.1 hypothetical protein -
  NYE62_RS05665 (NYE62_05665) - 1132405..1133343 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  NYE62_RS05670 (NYE62_05670) fabF 1133366..1134604 (+) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  NYE62_RS05675 (NYE62_05675) - 1134688..1135473 (+) 786 WP_042635051.1 DUF2268 domain-containing protein -
  NYE62_RS05680 (NYE62_05680) - 1135647..1136633 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=986195 NYE62_RS05650 WP_007409125.1 1130834..1131787(+) (med) [Bacillus sp. FSL K6-2861]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=986195 NYE62_RS05650 WP_007409125.1 1130834..1131787(+) (med) [Bacillus sp. FSL K6-2861]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785


Multiple sequence alignment