Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NYE62_RS04230 Genome accession   NZ_CP152037
Coordinates   869686..870477 (+) Length   263 a.a.
NCBI ID   WP_053573608.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2861     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 864686..875477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE62_RS04205 (NYE62_04205) - 866681..867565 (+) 885 WP_094032653.1 PhzF family phenazine biosynthesis isomerase -
  NYE62_RS04210 (NYE62_04210) - 867642..868226 (+) 585 WP_007408549.1 nitroreductase -
  NYE62_RS04215 (NYE62_04215) - 868265..868456 (-) 192 WP_003155508.1 YfhD family protein -
  NYE62_RS04220 (NYE62_04220) - 868527..868637 (-) 111 WP_003155504.1 YfhE family protein -
  NYE62_RS04225 (NYE62_04225) - 868695..869594 (-) 900 WP_144664955.1 TIGR01777 family oxidoreductase -
  NYE62_RS04230 (NYE62_04230) recX 869686..870477 (+) 792 WP_053573608.1 recombination regulator RecX Regulator
  NYE62_RS04235 (NYE62_04235) - 870484..870798 (+) 315 WP_077391961.1 YfhH family protein -
  NYE62_RS04240 (NYE62_04240) - 870943..872136 (+) 1194 WP_144664963.1 MFS transporter -
  NYE62_RS04245 (NYE62_04245) - 872176..872565 (-) 390 WP_144664956.1 DUF2606 family protein -
  NYE62_RS04250 (NYE62_04250) - 872528..873439 (-) 912 WP_014417237.1 serine protease -
  NYE62_RS04255 (NYE62_04255) - 873584..873736 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  NYE62_RS04260 (NYE62_04260) - 873860..874129 (+) 270 WP_003155492.1 YfhJ family protein -
  NYE62_RS04265 (NYE62_04265) - 874257..874784 (+) 528 WP_062623300.1 SH3 domain-containing protein -
  NYE62_RS04270 (NYE62_04270) - 874870..875205 (+) 336 WP_062623301.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30976.20 Da        Isoelectric Point: 6.0921

>NTDB_id=986187 NYE62_RS04230 WP_053573608.1 869686..870477(+) (recX) [Bacillus sp. FSL K6-2861]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIKQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=986187 NYE62_RS04230 WP_053573608.1 869686..870477(+) (recX) [Bacillus sp. FSL K6-2861]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACGCCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCGGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAGGACAAAAAGCTGTCCACAAAAGAGATCAAACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAGGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGTTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.848

100

0.798

Multiple sequence alignment