Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACAK31_RS03140 | Genome accession | NZ_AP031581 |
| Coordinates | 649252..649767 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain JUNP496 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 644252..654767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK31_RS03115 (JUNP496_0629) | - | 644798..646441 (+) | 1644 | WP_000281766.1 | nitrite/sulfite reductase | - |
| ACAK31_RS03120 (JUNP496_0630) | - | 646434..646919 (+) | 486 | WP_000935246.1 | DUF934 domain-containing protein | - |
| ACAK31_RS03125 (JUNP496_0631) | - | 647002..647355 (+) | 354 | WP_000457783.1 | multidrug efflux SMR transporter | - |
| ACAK31_RS03130 (JUNP496_0632) | - | 647398..647841 (-) | 444 | WP_001176580.1 | VOC family protein | - |
| ACAK31_RS03135 (JUNP496_0633) | - | 647968..649143 (-) | 1176 | WP_000129968.1 | thiolase family protein | - |
| ACAK31_RS03140 (JUNP496_0634) | fimT | 649252..649767 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACAK31_RS03145 (JUNP496_0635) | omp38 | 650149..651192 (+) | 1044 | WP_000777884.1 | outer membrane protein Omp38 | - |
| ACAK31_RS03150 (JUNP496_0636) | - | 651317..651460 (-) | 144 | WP_162541494.1 | hypothetical protein | - |
| ACAK31_RS03155 (JUNP496_0637) | - | 651479..652684 (-) | 1206 | WP_000512701.1 | RtcB family protein | - |
| ACAK31_RS03160 (JUNP496_0638) | - | 652960..654420 (-) | 1461 | WP_000004974.1 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=98616 ACAK31_RS03140 WP_000477151.1 649252..649767(-) (fimT) [Acinetobacter baumannii strain JUNP496]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=98616 ACAK31_RS03140 WP_000477151.1 649252..649767(-) (fimT) [Acinetobacter baumannii strain JUNP496]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |