Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NYE42_RS05645 Genome accession   NZ_CP152036
Coordinates   1127535..1127726 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus sp. FSL K6-2865     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1122535..1132726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE42_RS05615 (NYE42_05605) argF 1123387..1124358 (+) 972 WP_352426820.1 ornithine carbamoyltransferase -
  NYE42_RS05620 (NYE42_05610) - 1124434..1124613 (+) 180 WP_003155070.1 YjzC family protein -
  NYE42_RS05625 (NYE42_05615) - 1124650..1124835 (-) 186 WP_003155069.1 YjzD family protein -
  NYE42_RS05630 (NYE42_05620) - 1125096..1125830 (+) 735 WP_144664082.1 hypothetical protein -
  NYE42_RS05635 (NYE42_05625) - 1125913..1126479 (+) 567 WP_342497289.1 hypothetical protein -
  NYE42_RS05640 (NYE42_05630) med 1126569..1127522 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  NYE42_RS05645 (NYE42_05635) comZ 1127535..1127726 (+) 192 WP_003155061.1 ComZ family protein Regulator
  NYE42_RS05650 (NYE42_05640) - 1127755..1127973 (-) 219 WP_007409123.1 hypothetical protein -
  NYE42_RS05655 (NYE42_05645) - 1128140..1129078 (+) 939 WP_241458120.1 beta-ketoacyl-ACP synthase III -
  NYE42_RS05660 (NYE42_05650) fabF 1129101..1130339 (+) 1239 WP_020955629.1 beta-ketoacyl-ACP synthase II -
  NYE42_RS05665 (NYE42_05655) - 1130422..1131207 (+) 786 WP_032866148.1 DUF2268 domain-containing protein -
  NYE42_RS05670 (NYE42_05660) - 1131381..1132367 (+) 987 WP_007409119.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=986119 NYE42_RS05645 WP_003155061.1 1127535..1127726(+) (comZ) [Bacillus sp. FSL K6-2865]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=986119 NYE42_RS05645 WP_003155061.1 1127535..1127726(+) (comZ) [Bacillus sp. FSL K6-2865]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment