Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   NYE42_RS01845 Genome accession   NZ_CP152036
Coordinates   387320..387484 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2865     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 382320..392484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE42_RS01835 - 384785..385075 (+) 291 WP_352427002.1 hypothetical protein -
  NYE42_RS01840 (NYE42_01835) - 385153..387303 (+) 2151 Protein_322 amino acid adenylation domain-containing protein -
  NYE42_RS01845 (NYE42_01840) comS 387320..387484 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=986105 NYE42_RS01845 WP_012116773.1 387320..387484(+) (comS) [Bacillus sp. FSL K6-2865]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=986105 NYE42_RS01845 WP_012116773.1 387320..387484(+) (comS) [Bacillus sp. FSL K6-2865]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5


Multiple sequence alignment