Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHI58_RS11825 Genome accession   NZ_CP152035
Coordinates   2299001..2299804 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus sp. FSL K6-2869     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2294001..2304804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI58_RS11810 (MHI58_11810) - 2296217..2296453 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  MHI58_RS11815 (MHI58_11815) - 2296487..2297224 (-) 738 WP_045034364.1 glycerophosphodiester phosphodiesterase -
  MHI58_RS11820 (MHI58_11820) - 2297451..2298551 (-) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  MHI58_RS11825 (MHI58_11825) spo0A 2299001..2299804 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  MHI58_RS11830 (MHI58_11830) spoIVB 2300088..2301365 (-) 1278 WP_008342225.1 SpoIVB peptidase -
  MHI58_RS11835 (MHI58_11835) recN 2301564..2303297 (-) 1734 WP_035390783.1 DNA repair protein RecN Machinery gene
  MHI58_RS11840 (MHI58_11840) argR 2303332..2303781 (-) 450 WP_007501163.1 transcriptional regulator ArgR -
  MHI58_RS11845 (MHI58_11845) - 2303943..2304797 (-) 855 WP_041506970.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=986068 MHI58_RS11825 WP_008342226.1 2299001..2299804(-) (spo0A) [Bacillus sp. FSL K6-2869]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=986068 MHI58_RS11825 WP_008342226.1 2299001..2299804(-) (spo0A) [Bacillus sp. FSL K6-2869]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTACTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTTCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCAAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCCTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTAGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment