Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MHI58_RS05710 Genome accession   NZ_CP152035
Coordinates   1147368..1149194 (+) Length   608 a.a.
NCBI ID   WP_282746884.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-2869     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1142368..1154194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI58_RS05690 (MHI58_05690) - 1142630..1143295 (-) 666 WP_268431242.1 TerC family protein -
  MHI58_RS05695 (MHI58_05695) mecA 1143560..1144225 (+) 666 WP_326112600.1 adaptor protein MecA Regulator
  MHI58_RS05700 (MHI58_05700) cls 1144311..1145831 (+) 1521 WP_024720122.1 cardiolipin synthase -
  MHI58_RS05705 (MHI58_05705) - 1145993..1147153 (+) 1161 WP_056408060.1 competence protein CoiA -
  MHI58_RS05710 (MHI58_05710) pepF 1147368..1149194 (+) 1827 WP_282746884.1 oligoendopeptidase F Regulator
  MHI58_RS05715 (MHI58_05715) - 1149421..1149594 (-) 174 WP_008348466.1 hypothetical protein -
  MHI58_RS05720 (MHI58_05720) - 1149891..1150802 (-) 912 WP_007499002.1 ClpXP adapter SpxH family protein -
  MHI58_RS05725 (MHI58_05725) - 1150799..1151197 (-) 399 WP_007499001.1 thiol management oxidoreductase -
  MHI58_RS05730 (MHI58_05730) - 1151475..1152239 (-) 765 WP_368004384.1 lytic transglycosylase domain-containing protein -
  MHI58_RS05735 (MHI58_05735) - 1152265..1152840 (-) 576 WP_368004385.1 CYTH domain-containing protein -
  MHI58_RS05740 (MHI58_05740) - 1153058..1153423 (+) 366 WP_008348459.1 hypothetical protein -
  MHI58_RS05745 (MHI58_05745) - 1153457..1154086 (+) 630 WP_008348457.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70297.97 Da        Isoelectric Point: 5.2873

>NTDB_id=986055 MHI58_RS05710 WP_282746884.1 1147368..1149194(+) (pepF) [Bacillus sp. FSL K6-2869]
MTSQNNNNHLPDRSEVKEENKWRLEDIFESVDSWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDQLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSTSSTTFSMFNNADISFPSVKDENGEEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYKNTLAST
LSGSIKKDNFYAKVRHYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLEDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGEGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILEEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTGE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=986055 MHI58_RS05710 WP_282746884.1 1147368..1149194(+) (pepF) [Bacillus sp. FSL K6-2869]
ATGACTTCACAAAATAACAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGCCTTGAAGATAT
TTTTGAAAGTGTCGATTCTTGGAATAAGGAATTCGAAGCTGTAAAAAAAGAAATTCCGAAGCTCGCCCAATTTAAAGGCA
AGCTGGCCCATTCTGCTGATGTCTTGTATGAAGCCCTAACATTTCAGGATCAACTTTCTGAAAAGCTTGGTAAGCTTTAT
ACATATGCGCACATGAAATACGATGAAGATACAACAAATTCATCATTTCAGGCTTTAAATGATAAAGCATCCAATTTATT
TACACAGCTGTCTAGTACATCTGCCTATATTGTTCCGGAAATTTTATCTATTCAAGAAGATAAGCTGCAGCAATTTATTT
TGGAAAAAGAAGAATTAAAACTTTATTCTCACGCTCTCGAAGAAATTAACAAAGAGCGTCCGCATATTTTAAGTGAGGAG
CAAGAAGCTTTATTAGCTGAAGCCTCTGAACCTTTATCAACATCATCCACTACGTTTAGTATGTTTAATAATGCAGATAT
TTCGTTCCCTTCTGTTAAGGATGAAAATGGAGAAGAAAAGAAAATTACTCATGGCAACTTCATTACCTTTTTAAACAGTG
ATGATCGTGAAGTGAGAAAGAATGCTTTTAAAGCCGTTTATAAAACGTATGATCAATATAAGAATACTTTGGCGTCTACA
CTCAGCGGCTCGATTAAAAAGGATAATTTTTATGCGAAAGTACGTCATTACAAATCTGCAAGAGAAGCAGCGTTATCACG
CAACAGTATTCCTGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACACCGCTACATTG
AATTGCGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTATGACTTGTATACACCATTAGTAAAAGATGCTGGCATG
AAGCTGACGTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCGCCATTAGGAGAAGAATATGTTTCGGTATTAAA
AGAGGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGCGCGTATTCTTCTGGAAGCTATG
GTACGAATCCTTATATCTTAATGAACTGGCAAAATAATATTGATAATTTATTTACACTGGCTCATGAATTTGGTCACTCT
GTTCATAGCTACTATACAAGAAAGCATCAGCCATATCCGTACGGAAACTACAGTATTTTTGTAGCGGAAGTAGCTTCTAC
AACAAATGAAGCATTACTAGGTGAATACTTACTGAATCATTTAGAGGACAAAAAGCAGCGCTTGTATGTGCTCAATCATT
TGTTAGAAGGATTTAGAGGGACGGTATTCAGACAAACGATGTTTGCAGAGTTCGAGCACCTGATTCATGTGAAAGCGCAA
GAAGGGGAGGCATTAACGCCAGAGTTTATGACGAACCTGTATTACGACCTGAATAAGAAGTATTTTGGCGAAGGTATGGT
TGTGGATAAGGAAATCGGATTAGAATGGACGCGAATTCCGCATTTCTATTACAACTATTATGTGTATCAATATGCGACAG
GCTATAGTGCGGCTCAGGCATTAAGTAAACAAATTTTAGAAGAAGGGAAACCTGCGGTGGAGCGCTATACAGACTTCCTT
AAAGCAGGAAGCTCTGACTATCCAATCAACGTGCTGAAAAAAGCTGGTGTAGATATGGCATCGAAAGAGCCAATTGAGGC
AGCATGTCAATTGTTTGAAGAAAAATTAAAGGAAATGGAAGAGCTCATCTCAAAGACTGGTGAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.158

97.697

0.48

Multiple sequence alignment