Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHB83_RS15920 Genome accession   NZ_CP152034
Coordinates   3143805..3144608 (-) Length   267 a.a.
NCBI ID   WP_003215740.1    Uniprot ID   A0AB34QSQ5
Organism   Bacillus sp. FSL K6-3149     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 3138805..3149608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB83_RS15905 (MHB83_15905) - 3141014..3141250 (+) 237 WP_050943781.1 DUF2627 domain-containing protein -
  MHB83_RS15910 (MHB83_15910) - 3141285..3142022 (-) 738 WP_137054993.1 glycerophosphodiester phosphodiesterase -
  MHB83_RS15915 (MHB83_15915) - 3142248..3143348 (-) 1101 WP_003215741.1 Rap family tetratricopeptide repeat protein -
  MHB83_RS15920 (MHB83_15920) spo0A 3143805..3144608 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MHB83_RS15925 (MHB83_15925) spoIVB 3144894..3146171 (-) 1278 WP_106033130.1 SpoIVB peptidase -
  MHB83_RS15930 (MHB83_15930) recN 3146370..3148106 (-) 1737 WP_137054990.1 DNA repair protein RecN Machinery gene
  MHB83_RS15935 (MHB83_15935) argR 3148140..3148589 (-) 450 WP_003215836.1 transcriptional regulator ArgR -
  MHB83_RS15940 (MHB83_15940) - 3148749..3149603 (-) 855 WP_050943777.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29946.45 Da        Isoelectric Point: 6.3914

>NTDB_id=986022 MHB83_RS15920 WP_003215740.1 3143805..3144608(-) (spo0A) [Bacillus sp. FSL K6-3149]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRRNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=986022 MHB83_RS15920 WP_003215740.1 3143805..3144608(-) (spo0A) [Bacillus sp. FSL K6-3149]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTAACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGACATGACCAAACAG
CCAAGTGTGATTATGCTAACGGCGTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATCTAGGCGCATCTTATTTCAT
CTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCACCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGAAACAAACCTGAACCGAAACGCAGAAACTTAGATGCGAGCATTACAACGATT
ATTCATGAGATTGGCGTCCCGGCTCATATTAAAGGTTACTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
CGAGCTTCTCGGAAGCATCACAAAAGTGTTGTATCCAGACATCGCGAAGAAATTTAACACGACCGCGAGCAGAGTAGAAC
GAGCGATTCGTCATGCGATTGAAGTGGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACAGTC
AGCATGTCTAAAGCAAAACCAACCAATTCTGAATTTATCGCAATGGTGGCTGATCGTCTGCGCTTAGAGCATAGAGCAAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment