Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   MHH61_RS17940 Genome accession   NZ_CP152033
Coordinates   3484625..3485005 (+) Length   126 a.a.
NCBI ID   WP_051149980.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-3154     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3479625..3490005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH61_RS17930 (MHH61_17915) - 3480123..3483266 (+) 3144 WP_125587372.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  MHH61_RS17935 (MHH61_17920) - 3483460..3484368 (+) 909 WP_024425124.1 serine protease -
  MHH61_RS17940 (MHH61_17925) nucA/comI 3484625..3485005 (+) 381 WP_051149980.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MHH61_RS17945 (MHH61_17930) - 3485150..3485998 (+) 849 WP_024427077.1 STAS domain-containing protein -
  MHH61_RS17950 (MHH61_17935) - 3486031..3486573 (-) 543 WP_024425127.1 IseA DL-endopeptidase inhibitor family protein -
  MHH61_RS17955 (MHH61_17940) - 3486870..3487316 (+) 447 WP_125587373.1 hypothetical protein -
  MHH61_RS17960 (MHH61_17945) lexA 3487361..3487981 (-) 621 WP_024425129.1 transcriptional repressor LexA -
  MHH61_RS17965 (MHH61_17950) yneA 3488141..3488452 (+) 312 WP_041117521.1 cell division suppressor protein YneA -
  MHH61_RS17970 (MHH61_17955) - 3488470..3489117 (+) 648 WP_025093247.1 recombinase family protein -
  MHH61_RS17975 (MHH61_17960) - 3489187..3489417 (+) 231 WP_024425132.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13761.43 Da        Isoelectric Point: 8.5068

>NTDB_id=985975 MHH61_RS17940 WP_051149980.1 3484625..3485005(+) (nucA/comI) [Bacillus sp. FSL K6-3154]
MGTLFGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=985975 MHH61_RS17940 WP_051149980.1 3484625..3485005(+) (nucA/comI) [Bacillus sp. FSL K6-3154]
ATGGGCACGTTGTTTGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCGGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTTCAATATGTCAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCATCAAATCAGCGGATTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548

Multiple sequence alignment