Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACOCJK_RS01755 Genome accession   NZ_CP184541
Coordinates   392818..393663 (+) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SCTW2022336     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 387818..398663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCJK_RS01740 (ACOCJK_01740) - 388084..389925 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ACOCJK_RS01745 (ACOCJK_01745) metC 389894..391054 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  ACOCJK_RS01750 (ACOCJK_01750) - 391051..392154 (-) 1104 WP_000655690.1 PLP-dependent transferase -
  ACOCJK_RS01755 (ACOCJK_01755) spo0J 392818..393663 (+) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACOCJK_RS01760 (ACOCJK_01760) - 393817..394698 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  ACOCJK_RS01765 (ACOCJK_01765) - 394728..394931 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACOCJK_RS01770 (ACOCJK_01770) ychF 394943..396040 (+) 1098 WP_420228292.1 redox-regulated ATPase YchF -
  ACOCJK_RS01775 (ACOCJK_01775) - 396126..396317 (-) 192 WP_001052481.1 hypothetical protein -
  ACOCJK_RS01780 (ACOCJK_01780) rpsF 396561..396857 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACOCJK_RS01785 (ACOCJK_01785) ssbA 396878..397381 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACOCJK_RS01790 (ACOCJK_01790) rpsR 397433..397675 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACOCJK_RS01795 (ACOCJK_01795) - 397912..398139 (-) 228 Protein_356 Abi family protein -
  ACOCJK_RS01800 (ACOCJK_01800) - 398132..398408 (-) 277 Protein_357 site-specific integrase -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=985937 ACOCJK_RS01755 WP_001825659.1 392818..393663(+) (spo0J) [Staphylococcus aureus strain SCTW2022336]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=985937 ACOCJK_RS01755 WP_001825659.1 392818..393663(+) (spo0J) [Staphylococcus aureus strain SCTW2022336]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381


Multiple sequence alignment