Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH61_RS01230 | Genome accession | NZ_CP152033 |
| Coordinates | 217209..217544 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-3154 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 212209..222544
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH61_RS01210 (MHH61_01210) | gcvT | 212688..213785 (-) | 1098 | WP_024427995.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH61_RS01215 (MHH61_01215) | - | 214347..216017 (+) | 1671 | WP_024427994.1 | DEAD/DEAH box helicase | - |
| MHH61_RS01220 (MHH61_01220) | - | 216032..216829 (+) | 798 | WP_024427993.1 | YqhG family protein | - |
| MHH61_RS01225 (MHH61_01225) | - | 217011..217175 (+) | 165 | WP_073206269.1 | anti-repressor SinI family protein | - |
| MHH61_RS01230 (MHH61_01230) | sinR | 217209..217544 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHH61_RS01235 (MHH61_01235) | tasA | 217612..218412 (-) | 801 | WP_024422970.1 | biofilm matrix protein TasA | - |
| MHH61_RS01240 (MHH61_01240) | sipW | 218467..219039 (-) | 573 | WP_024422971.1 | signal peptidase I SipW | - |
| MHH61_RS01245 (MHH61_01245) | tapA | 219092..219619 (-) | 528 | WP_125586572.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH61_RS01250 (MHH61_01250) | - | 219919..220197 (+) | 279 | WP_171464609.1 | DUF3889 domain-containing protein | - |
| MHH61_RS01255 (MHH61_01255) | - | 220232..220426 (-) | 195 | WP_056767455.1 | YqzE family protein | - |
| MHH61_RS01260 (MHH61_01260) | comGG | 220486..220869 (-) | 384 | WP_125586574.1 | competence type IV pilus minor pilin ComGG | - |
| MHH61_RS01265 (MHH61_01265) | comGF | 220866..221393 (-) | 528 | WP_335374388.1 | competence type IV pilus minor pilin ComGF | - |
| MHH61_RS01270 (MHH61_01270) | comGE | 221305..221619 (-) | 315 | WP_025092974.1 | competence type IV pilus minor pilin ComGE | - |
| MHH61_RS01275 (MHH61_01275) | comGD | 221603..222049 (-) | 447 | WP_125586578.1 | competence type IV pilus minor pilin ComGD | - |
| MHH61_RS01280 (MHH61_01280) | comGC | 222042..222335 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=985917 MHH61_RS01230 WP_024422969.1 217209..217544(+) (sinR) [Bacillus sp. FSL K6-3154]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985917 MHH61_RS01230 WP_024422969.1 217209..217544(+) (sinR) [Bacillus sp. FSL K6-3154]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |