Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   MHI60_RS02305 Genome accession   NZ_CP152032
Coordinates   438054..438632 (-) Length   192 a.a.
NCBI ID   WP_024425481.1    Uniprot ID   A0A1L6ZJL9
Organism   Bacillus sp. FSL K6-3200     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 433054..443632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS02285 (MHI60_02285) - 434124..434402 (-) 279 WP_111290257.1 barstar family protein -
  MHI60_RS02290 (MHI60_02290) - 434468..435637 (-) 1170 WP_144485573.1 MFS transporter -
  MHI60_RS02295 (MHI60_02295) - 435783..437222 (+) 1440 WP_144485574.1 PLP-dependent aminotransferase family protein -
  MHI60_RS02300 (MHI60_02300) - 437254..437736 (-) 483 WP_144485576.1 hypothetical protein -
  MHI60_RS02305 (MHI60_02305) comK 438054..438632 (-) 579 WP_024425481.1 competence protein ComK Regulator
  MHI60_RS02310 (MHI60_02310) - 438922..439158 (+) 237 WP_008348804.1 IDEAL domain-containing protein -
  MHI60_RS02315 (MHI60_02315) - 439215..440075 (-) 861 WP_024425480.1 SDR family oxidoreductase -
  MHI60_RS02320 (MHI60_02320) - 440217..441749 (+) 1533 WP_144485578.1 FAD-dependent oxidoreductase -
  MHI60_RS02325 (MHI60_02325) - 441841..443136 (+) 1296 WP_144485580.1 globin-coupled sensor protein -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22350.37 Da        Isoelectric Point: 8.7996

>NTDB_id=985869 MHI60_RS02305 WP_024425481.1 438054..438632(-) (comK) [Bacillus sp. FSL K6-3200]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=985869 MHI60_RS02305 WP_024425481.1 438054..438632(-) (comK) [Bacillus sp. FSL K6-3200]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAACCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATATCCCATAAGCCTCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTTACCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGAACAGCATATCTCCGAACGAAATTTCAAGATCGTCTGGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGAGA
GCTTCGCAATAGATATTAG

Domains


Predicted by InterproScan.

(10-158)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L6ZJL9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.979

100

0.62


Multiple sequence alignment