Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MHI60_RS00680 Genome accession   NZ_CP152032
Coordinates   128821..129282 (+) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-3200     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 123821..134282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS00655 (MHI60_00655) - 123932..125209 (+) 1278 WP_048238778.1 MFS transporter -
  MHI60_RS00660 (MHI60_00660) - 125456..125671 (+) 216 WP_075622942.1 hypothetical protein -
  MHI60_RS00665 (MHI60_00665) - 125825..126721 (-) 897 WP_144470348.1 EamA family transporter -
  MHI60_RS00670 (MHI60_00670) - 126835..127761 (+) 927 WP_144470346.1 AraC family transcriptional regulator -
  MHI60_RS00675 (MHI60_00675) - 128174..128347 (-) 174 WP_186318630.1 hypothetical protein -
  MHI60_RS00680 (MHI60_00680) kre 128821..129282 (+) 462 WP_008356877.1 YkyB family protein Regulator
  MHI60_RS00685 (MHI60_00685) - 129320..130228 (-) 909 WP_095408359.1 chemotaxis protein -
  MHI60_RS00690 (MHI60_00690) - 130302..131612 (-) 1311 WP_144470345.1 MFS transporter -
  MHI60_RS00695 (MHI60_00695) - 131738..132277 (-) 540 WP_024424707.1 RDD family protein -
  MHI60_RS00700 (MHI60_00700) - 132579..132731 (+) 153 WP_162842519.1 hypothetical protein -
  MHI60_RS00705 (MHI60_00705) - 132796..133680 (-) 885 WP_095408357.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=985858 MHI60_RS00680 WP_008356877.1 128821..129282(+) (kre) [Bacillus sp. FSL K6-3200]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=985858 MHI60_RS00680 WP_008356877.1 128821..129282(+) (kre) [Bacillus sp. FSL K6-3200]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGAGCGCTGCAAAAACTATTACAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment