Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHI60_RS00555 Genome accession   NZ_CP152032
Coordinates   108310..108882 (-) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-3200     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 103310..113882
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI60_RS00525 (MHI60_00525) - 103351..103842 (-) 492 WP_144470365.1 molybdenum cofactor biosynthesis protein MoaE -
  MHI60_RS00530 (MHI60_00530) mobB 103839..104363 (-) 525 WP_144470363.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MHI60_RS00535 (MHI60_00535) glp 104345..105622 (-) 1278 WP_186318631.1 gephyrin-like molybdotransferase Glp -
  MHI60_RS00540 (MHI60_00540) - 105632..106648 (-) 1017 WP_144470360.1 thiazole biosynthesis adenylyltransferase ThiF -
  MHI60_RS00545 (MHI60_00545) - 106679..107260 (-) 582 WP_144470358.1 molybdenum cofactor guanylyltransferase -
  MHI60_RS00550 (MHI60_00550) - 107346..108263 (+) 918 WP_095408369.1 sigmaE regulated sporulation protein -
  MHI60_RS00555 (MHI60_00555) rok 108310..108882 (-) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  MHI60_RS00560 (MHI60_00560) - 109364..109822 (-) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  MHI60_RS00565 (MHI60_00565) ahpA 109905..110447 (-) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  MHI60_RS00570 (MHI60_00570) - 110720..111529 (+) 810 WP_095408368.1 mechanosensitive ion channel family protein -
  MHI60_RS00575 (MHI60_00575) - 111552..111794 (-) 243 WP_024424725.1 YkuS family protein -
  MHI60_RS00580 (MHI60_00580) - 111845..113023 (-) 1179 WP_144470356.1 N-acetyldiaminopimelate deacetylase -
  MHI60_RS00585 (MHI60_00585) dapD 113058..113768 (-) 711 WP_095408367.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=985857 MHI60_RS00555 WP_024426871.1 108310..108882(-) (rok) [Bacillus sp. FSL K6-3200]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=985857 MHI60_RS00555 WP_024426871.1 108310..108882(-) (rok) [Bacillus sp. FSL K6-3200]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAGACGGATTCACTCCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCTTCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGTTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment