Detailed information NTG0985854

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLB1J_RS22550
• Genome accession: NZ_CP184262
• Coordinates: 4629588..4630613 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain H32
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4624588..4635613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLB1J_RS22530 (ACLB1J_22530)	metJ	4625649..4625966 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACLB1J_RS22535 (ACLB1J_22535)	yiiX	4626150..4626758 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACLB1J_RS22540 (ACLB1J_22540)	rpmE	4626819..4627031 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLB1J_RS22545 (ACLB1J_22545)	priA	4627234..4629432 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
ACLB1J_RS22550 (ACLB1J_22550)	cytR	4629588..4630613 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLB1J_RS22555 (ACLB1J_22555)	ftsN	4630705..4631664 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACLB1J_RS22560 (ACLB1J_22560)	hslV	4631757..4632287 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLB1J_RS22565 (ACLB1J_22565)	hslU	4632297..4633628 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACLB1J_RS22570 (ACLB1J_22570)	menA	4633695..4634621 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLB1J_RS22575 (ACLB1J_22575)	rraA	4634714..4635199 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLB1J_RS22580 (ACLB1J_22580)	zapB	4635284..4635529 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=985854 ACLB1J_RS22550 WP_000644904.1 4629588..4630613(+) (cytR) [Escherichia coli strain H32]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=985854 ACLB1J_RS22550 WP_000644904.1 4629588..4630613(+) (cytR) [Escherichia coli strain H32]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628