Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MHH54_RS06935 Genome accession   NZ_CP152030
Coordinates   1399602..1400183 (+) Length   193 a.a.
NCBI ID   WP_003210851.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-4563     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1394602..1405183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH54_RS06905 (MHH54_06905) dapD 1394724..1395434 (+) 711 WP_003212204.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MHH54_RS06910 (MHH54_06910) - 1395469..1396647 (+) 1179 WP_050782659.1 N-acetyldiaminopimelate deacetylase -
  MHH54_RS06915 (MHH54_06915) - 1396698..1396940 (+) 243 WP_003211408.1 YkuS family protein -
  MHH54_RS06920 (MHH54_06920) - 1396970..1397776 (-) 807 WP_003211570.1 mechanosensitive ion channel family protein -
  MHH54_RS06925 (MHH54_06925) ahpA 1398048..1398590 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  MHH54_RS06930 (MHH54_06930) - 1398673..1399131 (+) 459 WP_050945138.1 TlpA disulfide reductase family protein -
  MHH54_RS06935 (MHH54_06935) rok 1399602..1400183 (+) 582 WP_003210851.1 transcriptional regulator Rok Regulator
  MHH54_RS06940 (MHH54_06940) - 1400236..1401153 (-) 918 WP_106035814.1 sigmaE regulated sporulation protein -
  MHH54_RS06945 (MHH54_06945) - 1401238..1401819 (+) 582 WP_106029780.1 molybdenum cofactor guanylyltransferase -
  MHH54_RS06950 (MHH54_06950) - 1401850..1402866 (+) 1017 WP_106029779.1 thiazole biosynthesis adenylyltransferase ThiF -
  MHH54_RS06955 (MHH54_06955) glp 1402876..1404153 (+) 1278 WP_342500814.1 gephyrin-like molybdotransferase Glp -
  MHH54_RS06960 (MHH54_06960) mobB 1404135..1404659 (+) 525 WP_003211651.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  MHH54_RS06965 (MHH54_06965) - 1404656..1405147 (+) 492 WP_342500815.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21839.83 Da        Isoelectric Point: 9.7310

>NTDB_id=985785 MHH54_RS06935 WP_003210851.1 1399602..1400183(+) (rok) [Bacillus sp. FSL K6-4563]
MFNEREALRLRLEQLNEAEVKVIREYQIERDTIYAKLRELDRHGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQP
PAQSQSNAVSTLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=985785 MHH54_RS06935 WP_003210851.1 1399602..1400183(+) (rok) [Bacillus sp. FSL K6-4563]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATACGATTTATGCAAAATTAAGAGAATTAGACCGTCATGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAAAGAAAAACGGATTCACTGCCTGTATTAGCTGAACTGGCTGCACAAGAAATGAGAAGCTACCAGCCG
CCTGCACAATCACAATCAAATGCTGTATCAACTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTCGCCCTGGTTCAAAGGCAGCTAAGCTTCGTGAAGCTGCGATTAAAACGTTAA
AGCGTCATAATGCAGCGATTAAAAGCTCTGAACTTCAAAAAGAAATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTTTAGAAGGCGA
TATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.053

98.446

0.798

Multiple sequence alignment