Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MHH54_RS05615 Genome accession   NZ_CP152030
Coordinates   1158342..1158539 (+) Length   65 a.a.
NCBI ID   WP_106029967.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-4563     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1153342..1163539
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH54_RS05585 (MHH54_05585) - 1153749..1153928 (+) 180 WP_003211282.1 YjzC family protein -
  MHH54_RS05590 (MHH54_05590) - 1154099..1155364 (+) 1266 WP_003212461.1 MFS transporter -
  MHH54_RS05595 (MHH54_05595) - 1155481..1155675 (-) 195 WP_044139919.1 YjzD family protein -
  MHH54_RS05600 (MHH54_05600) - 1155887..1156627 (+) 741 WP_003211061.1 hypothetical protein -
  MHH54_RS05605 (MHH54_05605) - 1156703..1157278 (+) 576 WP_137054791.1 nad binding enzyme -
  MHH54_RS05610 (MHH54_05610) med 1157369..1158331 (+) 963 WP_268493153.1 BMP family ABC transporter substrate-binding protein Regulator
  MHH54_RS05615 (MHH54_05615) comZ 1158342..1158539 (+) 198 WP_106029967.1 ComZ family protein Regulator
  MHH54_RS05620 (MHH54_05620) - 1158550..1158783 (-) 234 WP_342500777.1 hypothetical protein -
  MHH54_RS05625 (MHH54_05625) - 1158953..1159891 (+) 939 WP_003212296.1 beta-ketoacyl-ACP synthase III -
  MHH54_RS05630 (MHH54_05630) fabF 1159913..1161154 (+) 1242 WP_003211631.1 beta-ketoacyl-ACP synthase II -
  MHH54_RS05635 (MHH54_05635) - 1161232..1162026 (+) 795 WP_268493149.1 DUF2268 domain-containing protein -
  MHH54_RS05640 (MHH54_05640) - 1162197..1163177 (+) 981 WP_044139925.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7333.38 Da        Isoelectric Point: 4.2412

>NTDB_id=985777 MHH54_RS05615 WP_106029967.1 1158342..1158539(+) (comZ) [Bacillus sp. FSL K6-4563]
MQHEKSMAFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=985777 MHH54_RS05615 WP_106029967.1 1158342..1158539(+) (comZ) [Bacillus sp. FSL K6-4563]
ATGCAACACGAAAAATCGATGGCGTTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
AGGTATTCAGCTTGAGCCTGAAGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTCATGCAAGAGGCTTATGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment