Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | MHI39_RS25585 | Genome accession | NZ_CP152029 |
| Coordinates | 5109437..5110387 (-) | Length | 316 a.a. |
| NCBI ID | WP_058006801.1 | Uniprot ID | A0A8E2I8V8 |
| Organism | Heyndrickxia sp. FSL K6-6286 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 5046364..5123547 | 5109437..5110387 | within | 0 |
Gene organization within MGE regions
Location: 5046364..5123547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHI39_RS25300 (MHI39_25300) | - | 5046388..5046735 (+) | 348 | WP_058005749.1 | YojF family protein | - |
| MHI39_RS25305 (MHI39_25305) | bshB2 | 5046765..5047448 (+) | 684 | WP_058005748.1 | bacillithiol biosynthesis deacetylase BshB2 | - |
| MHI39_RS25310 (MHI39_25310) | - | 5047914..5048654 (+) | 741 | WP_058005747.1 | ABC transporter ATP-binding protein | - |
| MHI39_RS25315 (MHI39_25315) | - | 5048632..5049687 (+) | 1056 | WP_058005746.1 | ABC transporter permease | - |
| MHI39_RS25320 (MHI39_25320) | - | 5049732..5050391 (+) | 660 | WP_058005745.1 | TetR/AcrR family transcriptional regulator | - |
| MHI39_RS25325 (MHI39_25325) | - | 5050406..5051272 (-) | 867 | WP_058005744.1 | Cof-type HAD-IIB family hydrolase | - |
| MHI39_RS25330 (MHI39_25330) | - | 5051484..5052809 (+) | 1326 | WP_180212350.1 | short-chain fatty acid transporter | - |
| MHI39_RS25335 (MHI39_25335) | recQ | 5052864..5054987 (-) | 2124 | WP_180212316.1 | DNA helicase RecQ | - |
| MHI39_RS25340 (MHI39_25340) | - | 5055202..5056149 (-) | 948 | WP_278891064.1 | L-threonine 3-dehydrogenase | - |
| MHI39_RS25345 (MHI39_25345) | - | 5056447..5057637 (-) | 1191 | WP_058005740.1 | glycine C-acetyltransferase | - |
| MHI39_RS25350 (MHI39_25350) | - | 5057851..5058726 (-) | 876 | WP_058005739.1 | MurR/RpiR family transcriptional regulator | - |
| MHI39_RS25355 (MHI39_25355) | - | 5058833..5059780 (-) | 948 | WP_058005738.1 | GNAT family N-acetyltransferase | - |
| MHI39_RS25360 (MHI39_25360) | - | 5059812..5060960 (-) | 1149 | WP_058005737.1 | DUF1343 domain-containing protein | - |
| MHI39_RS25365 (MHI39_25365) | - | 5060983..5061681 (-) | 699 | WP_260838993.1 | DUF624 domain-containing protein | - |
| MHI39_RS25370 (MHI39_25370) | ugpC | 5061708..5062808 (-) | 1101 | WP_058005735.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| MHI39_RS25375 (MHI39_25375) | - | 5062820..5063563 (-) | 744 | WP_235813394.1 | carbohydrate ABC transporter permease | - |
| MHI39_RS25380 (MHI39_25380) | - | 5063728..5064651 (-) | 924 | WP_078110345.1 | sugar ABC transporter permease | - |
| MHI39_RS25385 (MHI39_25385) | - | 5064740..5066107 (-) | 1368 | WP_058005734.1 | sugar ABC transporter substrate-binding protein | - |
| MHI39_RS25390 (MHI39_25390) | nagZ | 5066206..5067810 (-) | 1605 | WP_259548441.1 | beta-N-acetylhexosaminidase | - |
| MHI39_RS25395 (MHI39_25395) | - | 5067826..5068527 (-) | 702 | WP_058005733.1 | PIG-L deacetylase family protein | - |
| MHI39_RS25400 (MHI39_25400) | - | 5068546..5069583 (-) | 1038 | WP_058005732.1 | serine hydrolase domain-containing protein | - |
| MHI39_RS25405 (MHI39_25405) | murQ | 5069573..5070502 (-) | 930 | WP_058005731.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| MHI39_RS25410 (MHI39_25410) | - | 5070562..5071521 (-) | 960 | WP_058005730.1 | GNAT family N-acetyltransferase | - |
| MHI39_RS25415 (MHI39_25415) | - | 5071753..5072517 (-) | 765 | WP_058005729.1 | HAD family hydrolase | - |
| MHI39_RS25420 (MHI39_25420) | - | 5072514..5073335 (-) | 822 | WP_058005728.1 | carbohydrate ABC transporter permease | - |
| MHI39_RS25425 (MHI39_25425) | - | 5073349..5074302 (-) | 954 | WP_079991321.1 | sugar ABC transporter permease | - |
| MHI39_RS25430 (MHI39_25430) | - | 5074379..5075644 (-) | 1266 | WP_251346238.1 | extracellular solute-binding protein | - |
| MHI39_RS25435 (MHI39_25435) | - | 5076057..5077601 (-) | 1545 | WP_058005726.1 | glycoside hydrolase family 10 protein | - |
| MHI39_RS25440 (MHI39_25440) | anmK | 5077735..5078889 (-) | 1155 | WP_058005725.1 | anhydro-N-acetylmuramic acid kinase AnmK | - |
| MHI39_RS25445 (MHI39_25445) | - | 5078936..5079838 (-) | 903 | WP_058005724.1 | BadF/BadG/BcrA/BcrD ATPase family protein | - |
| MHI39_RS25450 (MHI39_25450) | - | 5079879..5080955 (-) | 1077 | WP_310795848.1 | MupG family TIM beta-alpha barrel fold protein | - |
| MHI39_RS25455 (MHI39_25455) | - | 5081139..5082512 (-) | 1374 | WP_058005722.1 | PTS transporter subunit EIIC | - |
| MHI39_RS25460 (MHI39_25460) | murQ | 5082533..5083417 (-) | 885 | WP_058005721.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| MHI39_RS25465 (MHI39_25465) | - | 5083610..5084779 (-) | 1170 | WP_058005720.1 | MalY/PatB family protein | - |
| MHI39_RS25475 (MHI39_25475) | - | 5086362..5087474 (-) | 1113 | WP_058006938.1 | PRK06851 family protein | - |
| MHI39_RS25480 (MHI39_25480) | - | 5087748..5087939 (-) | 192 | WP_058006937.1 | SE1832 family protein | - |
| MHI39_RS25485 (MHI39_25485) | - | 5087983..5088501 (-) | 519 | WP_278891050.1 | GNAT family N-acetyltransferase | - |
| MHI39_RS25490 (MHI39_25490) | - | 5088645..5089295 (+) | 651 | WP_058006935.1 | LytTR family DNA-binding domain-containing protein | - |
| MHI39_RS25495 (MHI39_25495) | - | 5089528..5091042 (+) | 1515 | WP_058006934.1 | acetyl-CoA hydrolase/transferase family protein | - |
| MHI39_RS25500 (MHI39_25500) | - | 5091108..5092490 (-) | 1383 | WP_058006883.1 | L-cystine transporter | - |
| MHI39_RS25505 (MHI39_25505) | - | 5092802..5093215 (+) | 414 | WP_058006884.1 | hypothetical protein | - |
| MHI39_RS25510 (MHI39_25510) | - | 5093260..5094831 (-) | 1572 | WP_058006885.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| MHI39_RS25515 (MHI39_25515) | - | 5095199..5096149 (+) | 951 | WP_342540436.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| MHI39_RS25520 (MHI39_25520) | phnE | 5096368..5097159 (-) | 792 | WP_058006887.1 | phosphonate ABC transporter, permease protein PhnE | - |
| MHI39_RS25525 (MHI39_25525) | phnE | 5097156..5097935 (-) | 780 | WP_058006888.1 | phosphonate ABC transporter, permease protein PhnE | - |
| MHI39_RS25530 (MHI39_25530) | phnC | 5097932..5098705 (-) | 774 | WP_058006889.1 | phosphonate ABC transporter ATP-binding protein | - |
| MHI39_RS25535 (MHI39_25535) | - | 5099338..5099466 (-) | 129 | WP_257234359.1 | hypothetical protein | - |
| MHI39_RS25540 (MHI39_25540) | - | 5099533..5100765 (-) | 1233 | WP_058006810.1 | DEAD/DEAH box helicase | - |
| MHI39_RS25545 (MHI39_25545) | asnB | 5100896..5102743 (-) | 1848 | WP_058006809.1 | asparagine synthase (glutamine-hydrolyzing) | - |
| MHI39_RS25550 (MHI39_25550) | - | 5102965..5103564 (+) | 600 | WP_212945020.1 | undecaprenyl-diphosphatase | - |
| MHI39_RS25555 (MHI39_25555) | - | 5103792..5104229 (-) | 438 | WP_058006807.1 | threonine/serine exporter family protein | - |
| MHI39_RS25560 (MHI39_25560) | - | 5104281..5105045 (-) | 765 | WP_058006806.1 | threonine/serine exporter family protein | - |
| MHI39_RS25565 (MHI39_25565) | - | 5105456..5106472 (+) | 1017 | WP_058006805.1 | DUF1646 family protein | - |
| MHI39_RS25570 (MHI39_25570) | - | 5106591..5107562 (-) | 972 | WP_058006804.1 | siderophore ABC transporter substrate-binding protein | - |
| MHI39_RS25575 (MHI39_25575) | - | 5107742..5108500 (-) | 759 | WP_058006803.1 | ABC transporter ATP-binding protein | - |
| MHI39_RS25580 (MHI39_25580) | - | 5108497..5109444 (-) | 948 | WP_058006802.1 | iron chelate uptake ABC transporter family permease subunit | - |
| MHI39_RS25585 (MHI39_25585) | ceuB | 5109437..5110387 (-) | 951 | WP_058006801.1 | ABC transporter permease | Machinery gene |
| MHI39_RS25590 (MHI39_25590) | - | 5110714..5111040 (-) | 327 | WP_058006800.1 | potassium channel family protein | - |
| MHI39_RS25595 (MHI39_25595) | - | 5111507..5113081 (+) | 1575 | WP_058006960.1 | IS1182 family transposase | - |
| MHI39_RS25600 (MHI39_25600) | - | 5113177..5113899 (-) | 723 | WP_058006161.1 | amino acid ABC transporter ATP-binding protein | - |
| MHI39_RS25605 (MHI39_25605) | - | 5113896..5114549 (-) | 654 | WP_058006160.1 | amino acid ABC transporter permease | - |
| MHI39_RS25610 (MHI39_25610) | - | 5114646..5115467 (-) | 822 | WP_058006159.1 | basic amino acid ABC transporter substrate-binding protein | - |
| MHI39_RS25615 (MHI39_25615) | abc-f | 5115799..5117607 (-) | 1809 | WP_058006158.1 | ABC-F type ribosomal protection protein | - |
| MHI39_RS25620 (MHI39_25620) | - | 5118147..5119574 (-) | 1428 | WP_342540437.1 | amino acid permease | - |
| MHI39_RS25625 (MHI39_25625) | - | 5119779..5120618 (+) | 840 | WP_058006156.1 | HAD family hydrolase | - |
| MHI39_RS25630 (MHI39_25630) | - | 5120716..5122389 (-) | 1674 | WP_058006155.1 | methyl-accepting chemotaxis protein | - |
| MHI39_RS25635 (MHI39_25635) | - | 5122562..5123461 (-) | 900 | WP_058006154.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 34586.87 Da Isoelectric Point: 9.7218
>NTDB_id=985758 MHI39_RS25585 WP_058006801.1 5109437..5110387(-) (ceuB) [Heyndrickxia sp. FSL K6-6286]
MKKVVLILMFIVLSIISLFVGVQNITPLDIFHLTDEQKDILLISRLPRLVSLILAGASMSICGLIMQQLSRNKFVSPTTA
GTMDSARLGILVSLIIFSSASMLEKMVLASLFALIGTFVFMKVLDKIKFKDAIFIPLVGLMFGNIISSITTFFAYKHDLI
QSISSWLQGDFSMVMSGRYEMIYISIPLLILAYLFAGKFTLAGMGEDFAVNLGLNYKVVVNIGLVIVALSATSVLLTVGT
IPFLGLVVPNIVSIYNGDNLKKNLSQTALLGAVFLLFCDILGRIIIYPYEIPIGLTVGVIGSGIFLYLLMRRKAYA
MKKVVLILMFIVLSIISLFVGVQNITPLDIFHLTDEQKDILLISRLPRLVSLILAGASMSICGLIMQQLSRNKFVSPTTA
GTMDSARLGILVSLIIFSSASMLEKMVLASLFALIGTFVFMKVLDKIKFKDAIFIPLVGLMFGNIISSITTFFAYKHDLI
QSISSWLQGDFSMVMSGRYEMIYISIPLLILAYLFAGKFTLAGMGEDFAVNLGLNYKVVVNIGLVIVALSATSVLLTVGT
IPFLGLVVPNIVSIYNGDNLKKNLSQTALLGAVFLLFCDILGRIIIYPYEIPIGLTVGVIGSGIFLYLLMRRKAYA
Nucleotide
Download Length: 951 bp
>NTDB_id=985758 MHI39_RS25585 WP_058006801.1 5109437..5110387(-) (ceuB) [Heyndrickxia sp. FSL K6-6286]
ATGAAAAAAGTAGTTTTAATACTCATGTTTATTGTTCTATCAATTATTTCATTATTTGTAGGTGTTCAAAATATTACACC
ACTTGATATTTTTCATCTTACTGATGAACAAAAAGACATTTTGCTTATTAGCAGATTGCCAAGATTAGTTAGTTTGATAT
TAGCTGGAGCTAGTATGAGTATATGTGGTTTGATTATGCAGCAGTTATCCCGGAATAAGTTTGTATCACCAACGACTGCT
GGAACGATGGATTCTGCGAGATTAGGGATTCTTGTTTCCTTAATTATTTTCTCGTCAGCCAGTATGCTGGAAAAAATGGT
GTTAGCTTCTTTATTTGCACTTATAGGAACATTCGTGTTTATGAAGGTTCTAGATAAAATTAAGTTCAAGGATGCCATCT
TTATTCCACTTGTTGGTTTAATGTTCGGGAATATTATTAGCTCGATTACCACGTTTTTTGCTTATAAGCATGATTTGATA
CAGAGTATATCATCATGGCTGCAGGGGGATTTCTCCATGGTAATGTCAGGGAGATATGAAATGATCTATATCAGTATTCC
TCTGCTTATCCTAGCGTATTTATTTGCAGGTAAATTTACATTAGCAGGTATGGGAGAAGATTTTGCTGTAAATCTTGGCT
TAAATTATAAGGTTGTTGTAAATATTGGATTGGTAATTGTGGCATTATCTGCAACCTCAGTATTGTTAACTGTAGGGACA
ATTCCATTCCTTGGGTTGGTTGTTCCAAATATTGTTTCCATTTATAACGGTGACAATTTAAAGAAAAACCTTTCTCAAAC
TGCCCTATTAGGTGCCGTGTTCTTGTTGTTCTGTGACATTTTAGGCCGCATCATCATTTATCCATATGAAATTCCAATTG
GATTAACGGTTGGTGTAATAGGAAGTGGTATTTTCCTTTACTTACTTATGAGGAGAAAGGCATATGCGTAA
ATGAAAAAAGTAGTTTTAATACTCATGTTTATTGTTCTATCAATTATTTCATTATTTGTAGGTGTTCAAAATATTACACC
ACTTGATATTTTTCATCTTACTGATGAACAAAAAGACATTTTGCTTATTAGCAGATTGCCAAGATTAGTTAGTTTGATAT
TAGCTGGAGCTAGTATGAGTATATGTGGTTTGATTATGCAGCAGTTATCCCGGAATAAGTTTGTATCACCAACGACTGCT
GGAACGATGGATTCTGCGAGATTAGGGATTCTTGTTTCCTTAATTATTTTCTCGTCAGCCAGTATGCTGGAAAAAATGGT
GTTAGCTTCTTTATTTGCACTTATAGGAACATTCGTGTTTATGAAGGTTCTAGATAAAATTAAGTTCAAGGATGCCATCT
TTATTCCACTTGTTGGTTTAATGTTCGGGAATATTATTAGCTCGATTACCACGTTTTTTGCTTATAAGCATGATTTGATA
CAGAGTATATCATCATGGCTGCAGGGGGATTTCTCCATGGTAATGTCAGGGAGATATGAAATGATCTATATCAGTATTCC
TCTGCTTATCCTAGCGTATTTATTTGCAGGTAAATTTACATTAGCAGGTATGGGAGAAGATTTTGCTGTAAATCTTGGCT
TAAATTATAAGGTTGTTGTAAATATTGGATTGGTAATTGTGGCATTATCTGCAACCTCAGTATTGTTAACTGTAGGGACA
ATTCCATTCCTTGGGTTGGTTGTTCCAAATATTGTTTCCATTTATAACGGTGACAATTTAAAGAAAAACCTTTCTCAAAC
TGCCCTATTAGGTGCCGTGTTCTTGTTGTTCTGTGACATTTTAGGCCGCATCATCATTTATCCATATGAAATTCCAATTG
GATTAACGGTTGGTGTAATAGGAAGTGGTATTTTCCTTTACTTACTTATGAGGAGAAAGGCATATGCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
56.09 |
98.734 |
0.554 |