Detailed information NTG0985722

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACOAKG_RS14680
• Genome accession: NZ_CP184261
• Coordinates: 3302959..3304242 (-)
• Length: 427 a.a.
• NCBI ID: WP_330354207.1
• Uniprot ID: -
• Organism: Streptomyces sp. JL3001
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3297959..3309242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOAKG_RS14670 (ACOAKG_14670)	-	3299137..3301761 (-)	2625	WP_359449494.1	valine--tRNA ligase	-
ACOAKG_RS14675 (ACOAKG_14675)	-	3301898..3302887 (+)	990	WP_330354206.1	hypothetical protein	-
ACOAKG_RS14680 (ACOAKG_14680)	clpX	3302959..3304242 (-)	1284	WP_330354207.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACOAKG_RS14685 (ACOAKG_14685)	clpP	3304424..3305104 (-)	681	WP_030967071.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACOAKG_RS14690 (ACOAKG_14690)	-	3305155..3305763 (-)	609	WP_030967072.1	ATP-dependent Clp protease proteolytic subunit	-
ACOAKG_RS14695 (ACOAKG_14695)	tig	3306127..3307521 (-)	1395	WP_330354208.1	trigger factor	-
ACOAKG_RS14710 (ACOAKG_14710)	-	3308085..3308516 (-)	432	WP_359449483.1	DUF7144 family membrane protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46748.51 Da
• Isoelectric Point: 4.7809

>NTDB_id=985722 ACOAKG_RS14680 WP_330354207.1 3302959..3304242(-) (clpX) [Streptomyces sp. JL3001]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARRGPGEQKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=985722 ACOAKG_RS14680 WP_330354207.1 3302959..3304242(-) (clpX) [Streptomyces sp. JL3001]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAAGCA
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGCGTTCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
TGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTGGCGCAGA
CCCTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCCACCGCGCTGACGGAGGCCGGTTATGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCTTCGATCACGCGCGATGTGTCCGGCGAGGGTGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACGACCGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTTGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGCTTGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACGTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCCGACGTCGTCCACTCCAACGTGAACCCGACCCTGATCCCGCGCGACGCGCGACGGGGCCCGGGGGAGCAGAAGTCGGC
CTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	94.145	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.253	0.527