Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACN6AT_RS24495 Genome accession   NZ_CP184255
Coordinates   5330040..5331773 (-) Length   577 a.a.
NCBI ID   WP_420080867.1    Uniprot ID   -
Organism   Streptomyces sp. JL4002     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5325040..5336773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6AT_RS24475 (ACN6AT_24470) - 5325229..5326248 (-) 1020 WP_420080863.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  ACN6AT_RS24480 (ACN6AT_24475) - 5326245..5326826 (-) 582 WP_420080864.1 hypothetical protein -
  ACN6AT_RS24485 (ACN6AT_24480) rpoS 5326999..5328051 (+) 1053 WP_420080865.1 RNA polymerase sigma factor Regulator
  ACN6AT_RS24490 (ACN6AT_24485) rcrQ 5328121..5330043 (-) 1923 WP_420080866.1 ABC transporter ATP-binding protein Regulator
  ACN6AT_RS24495 (ACN6AT_24490) rcrP 5330040..5331773 (-) 1734 WP_420080867.1 ABC transporter ATP-binding protein Regulator
  ACN6AT_RS24500 (ACN6AT_24495) - 5331966..5333414 (-) 1449 WP_361594581.1 FGGY family carbohydrate kinase -
  ACN6AT_RS24505 (ACN6AT_24500) - 5333512..5333814 (-) 303 WP_361594579.1 YtxH domain-containing protein -
  ACN6AT_RS24525 (ACN6AT_24520) - 5334947..5336104 (-) 1158 WP_420080868.1 carboxylate-amine ligase -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62500.41 Da        Isoelectric Point: 4.7974

>NTDB_id=985673 ACN6AT_RS24495 WP_420080867.1 5330040..5331773(-) (rcrP) [Streptomyces sp. JL4002]
MLIRLLRTHLGPYRKPIWALVLLQLLQTSASLYLPTLNADIIDNGVVNGDTGYILTFGALMLGVSLVQLVCNVGAVYFGA
RTAAAVGRDIRAAVFDRVQGFSSRELGQFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCIGGIAMALSLDVQLSGV
LLAVVPVLGVSVGAIVFRTRPLFRLMQERLDTVNRVLREQITGNRVIRAFVRDDYEKDRFRDANGDLTGVSLASGRLLAL
MFPVVILVVNISSVAVIWFGAMRVDSGGMEIGQLTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIQEVLDTESSVVP
PAEPVRELTRRGLLELRGADFRYPGAEAPVLRGVDLVARPGETTAVIGSTGSGKSTLLGLVPRLFDTTGGEVLVDGEDVR
GLDPELLARTVGMVPQKPYLFSGTIASNLRYGRPDASDEELWQALEVAQAREFVSALEGGLEAPVTQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETEDATVVIVAQRVATIRDADRIIVLDEGQVVGEGRHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=985673 ACN6AT_RS24495 WP_420080867.1 5330040..5331773(-) (rcrP) [Streptomyces sp. JL4002]
GTGCTCATACGACTCTTGCGGACCCATCTGGGTCCGTACCGCAAACCCATCTGGGCGCTGGTCCTGCTGCAACTCCTGCA
GACCAGCGCGAGCCTCTACCTGCCCACCCTCAACGCCGACATCATCGACAACGGTGTCGTCAACGGGGACACGGGCTACA
TCCTGACCTTCGGCGCCCTGATGCTGGGCGTCTCCCTCGTGCAGCTGGTCTGCAACGTCGGGGCCGTCTACTTCGGTGCC
CGCACGGCGGCCGCCGTCGGCCGCGACATCCGTGCCGCCGTCTTCGACCGGGTGCAGGGCTTCTCCTCCCGGGAGCTCGG
CCAGTTCGGCGCCCCGTCCCTGATCACCCGTACGACGAACGACGTCCAGCAGGTCCAGATGCTGGTGCTGATGACCTTCA
CCCTGATGGTCTCCGCGCCGATCATGTGCATCGGCGGCATCGCGATGGCGCTGTCGCTGGACGTGCAGCTCTCGGGCGTG
CTGCTGGCCGTCGTCCCGGTCCTCGGTGTGTCGGTCGGCGCCATCGTCTTCCGGACGCGGCCGCTCTTCCGCCTGATGCA
GGAGCGGCTGGACACGGTGAACCGCGTGCTGCGCGAGCAGATCACCGGCAACCGGGTGATCCGCGCGTTCGTCCGCGACG
ACTACGAGAAGGACCGGTTCCGCGACGCCAACGGTGATCTCACCGGTGTCTCGCTGGCCTCGGGCCGGCTGCTGGCCCTC
ATGTTCCCGGTCGTCATCCTGGTGGTGAACATCTCCAGCGTCGCCGTCATCTGGTTCGGCGCCATGCGCGTCGACAGCGG
CGGCATGGAGATCGGCCAGCTGACGGCCTTCCTCGCCTACCTGATGCAGATCGTGATGGCGGTCATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTCTGCGCGGAGCGCATCCAGGAGGTCCTGGACACCGAGTCCAGCGTGGTCCCG
CCCGCCGAGCCGGTGCGCGAGCTCACCCGTCGCGGGCTCCTGGAACTGCGCGGCGCCGACTTCCGCTATCCGGGTGCCGA
GGCGCCGGTGCTGCGCGGAGTGGACCTGGTGGCCCGCCCCGGCGAGACCACCGCCGTGATCGGCTCCACGGGCAGCGGGA
AGTCCACCCTGCTGGGTCTGGTCCCGCGGCTGTTCGACACCACCGGCGGTGAGGTGCTGGTCGACGGCGAGGACGTCCGC
GGGCTGGACCCGGAGCTGCTGGCCAGGACGGTCGGCATGGTTCCGCAGAAGCCCTACCTGTTCTCGGGGACCATCGCCTC
GAACCTGCGCTACGGCCGCCCGGACGCGAGCGACGAAGAGCTGTGGCAGGCGCTGGAAGTGGCCCAGGCCCGGGAGTTCG
TCTCCGCGCTGGAAGGGGGTCTGGAGGCTCCGGTCACCCAGGGCGGCACCAATGTCTCCGGCGGCCAGCGCCAGCGCCTG
GCCATCGCCCGCACCCTCGTGCAGCGCCCCGAGATCTACCTCTTCGACGACTCCTTCTCGGCCCTGGACTACGCGACGGA
CGCGGCGCTGCGCGCGGCGCTCGCCCGGGAGACCGAGGACGCGACCGTGGTCATCGTCGCGCAGCGCGTCGCGACGATCC
GTGACGCCGACCGGATCATCGTGCTCGACGAGGGCCAGGTCGTGGGCGAGGGCCGCCATCACGAGCTGATGGCGGGCAAT
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTGACGGAGGCGGAGGCCGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.451

100

0.399