Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHB66_RS11585 | Genome accession | NZ_CP152027 |
| Coordinates | 2255638..2255973 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL L8-0167 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2250638..2260973
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB66_RS11565 (MHB66_11565) | gcvT | 2251115..2252212 (-) | 1098 | WP_046311744.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHB66_RS11570 (MHB66_11570) | - | 2252774..2254444 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| MHB66_RS11575 (MHB66_11575) | - | 2254459..2255256 (+) | 798 | WP_034280228.1 | YqhG family protein | - |
| MHB66_RS11580 (MHB66_11580) | - | 2255440..2255604 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| MHB66_RS11585 (MHB66_11585) | sinR | 2255638..2255973 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHB66_RS11590 (MHB66_11590) | - | 2256041..2256841 (-) | 801 | WP_034280222.1 | TasA family protein | - |
| MHB66_RS11595 (MHB66_11595) | - | 2256899..2257471 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| MHB66_RS11600 (MHB66_11600) | tapA | 2257524..2258051 (-) | 528 | WP_046311747.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHB66_RS11605 (MHB66_11605) | - | 2258351..2258629 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| MHB66_RS11610 (MHB66_11610) | - | 2258664..2258858 (-) | 195 | WP_046311750.1 | YqzE family protein | - |
| MHB66_RS11615 (MHB66_11615) | comGG | 2258918..2259301 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| MHB66_RS11620 (MHB66_11620) | comGF | 2259298..2259825 (-) | 528 | WP_259407219.1 | competence type IV pilus minor pilin ComGF | - |
| MHB66_RS11625 (MHB66_11625) | comGE | 2259737..2260051 (-) | 315 | WP_041106865.1 | competence type IV pilus minor pilin ComGE | - |
| MHB66_RS11630 (MHB66_11630) | comGD | 2260035..2260481 (-) | 447 | WP_046311754.1 | competence type IV pilus minor pilin ComGD | - |
| MHB66_RS11635 (MHB66_11635) | comGC | 2260474..2260767 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=985637 MHB66_RS11585 WP_024422969.1 2255638..2255973(+) (sinR) [Bacillus sp. FSL L8-0167]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985637 MHB66_RS11585 WP_024422969.1 2255638..2255973(+) (sinR) [Bacillus sp. FSL L8-0167]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |