Detailed information NTG0985603

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACLB14_RS21220
• Genome accession: NZ_CP184155
• Coordinates: 4361783..4362808 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C21
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4356783..4367808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLB14_RS21200 (ACLB14_21200)	metJ	4357844..4358161 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACLB14_RS21205 (ACLB14_21205)	yiiX	4358345..4358953 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACLB14_RS21210 (ACLB14_21210)	rpmE	4359014..4359226 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACLB14_RS21215 (ACLB14_21215)	priA	4359429..4361627 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACLB14_RS21220 (ACLB14_21220)	cytR	4361783..4362808 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACLB14_RS21225 (ACLB14_21225)	ftsN	4362900..4363859 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACLB14_RS21230 (ACLB14_21230)	hslV	4363952..4364482 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACLB14_RS21235 (ACLB14_21235)	hslU	4364492..4365823 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACLB14_RS21240 (ACLB14_21240)	menA	4365890..4366816 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACLB14_RS21245 (ACLB14_21245)	rraA	4366909..4367394 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACLB14_RS21250 (ACLB14_21250)	zapB	4367479..4367724 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=985603 ACLB14_RS21220 WP_000644904.1 4361783..4362808(+) (cytR) [Escherichia coli strain C21]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=985603 ACLB14_RS21220 WP_000644904.1 4361783..4362808(+) (cytR) [Escherichia coli strain C21]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628