Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH65_RS11235 | Genome accession | NZ_CP152026 |
| Coordinates | 2207214..2207549 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL L8-0654 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2202214..2212549
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH65_RS11215 (MHH65_11215) | gcvT | 2202691..2203788 (-) | 1098 | WP_024427995.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH65_RS11220 (MHH65_11220) | - | 2204350..2206020 (+) | 1671 | WP_034280230.1 | SNF2-related protein | - |
| MHH65_RS11225 (MHH65_11225) | - | 2206035..2206832 (+) | 798 | WP_268418254.1 | YqhG family protein | - |
| MHH65_RS11230 (MHH65_11230) | - | 2207016..2207180 (+) | 165 | WP_075623492.1 | anti-repressor SinI family protein | - |
| MHH65_RS11235 (MHH65_11235) | sinR | 2207214..2207549 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHH65_RS11240 (MHH65_11240) | - | 2207617..2208417 (-) | 801 | WP_176966992.1 | TasA family protein | - |
| MHH65_RS11245 (MHH65_11245) | - | 2208475..2209047 (-) | 573 | WP_034280218.1 | signal peptidase I | - |
| MHH65_RS11250 (MHH65_11250) | tapA | 2209100..2209627 (-) | 528 | WP_041117967.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH65_RS11255 (MHH65_11255) | - | 2209927..2210205 (+) | 279 | WP_061109527.1 | DUF3889 domain-containing protein | - |
| MHH65_RS11260 (MHH65_11260) | - | 2210240..2210434 (-) | 195 | WP_024422974.1 | YqzE family protein | - |
| MHH65_RS11265 (MHH65_11265) | comGG | 2210494..2210877 (-) | 384 | WP_041117969.1 | competence type IV pilus minor pilin ComGG | - |
| MHH65_RS11270 (MHH65_11270) | comGF | 2210874..2211401 (-) | 528 | WP_264315971.1 | competence type IV pilus minor pilin ComGF | - |
| MHH65_RS11275 (MHH65_11275) | comGE | 2211313..2211627 (-) | 315 | WP_264315972.1 | competence type IV pilus minor pilin ComGE | - |
| MHH65_RS11280 (MHH65_11280) | comGD | 2211611..2212057 (-) | 447 | WP_034621605.1 | competence type IV pilus minor pilin ComGD | - |
| MHH65_RS11285 (MHH65_11285) | comGC | 2212050..2212343 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=985576 MHH65_RS11235 WP_024422969.1 2207214..2207549(+) (sinR) [Bacillus sp. FSL L8-0654]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=985576 MHH65_RS11235 WP_024422969.1 2207214..2207549(+) (sinR) [Bacillus sp. FSL L8-0654]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |